RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 STX4Q12846 297 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 CHIT1Q13231 466 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 TRADDQ15628 312 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 PDK4Q16654 411 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 ADPRMQ3LIE5 342 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 SULT1C3Q6IMI6 304 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 TRIM40Q6P9F5 258 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 HSDL2Q6YN16 418 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 DGAT2L6Q6ZPD8 337 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 LHFPL2Q6ZUX7 228 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 CMC1Q7Z7K0 106 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 ZNF595Q8IYB9 648 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 KRT78Q8N1N4 520 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 TMEM132CQ8N3T6 1108 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 ACOT4Q8N9L9 421 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 ZFP62Q8NB50 900 aaPredicted RBP5.75□□□□□ -1.49
NUP88-212ENST00000576708 POGLUT1Q8NBL1 392 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 PSD4Q8NDX1 1056 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 OR2M7Q8NG81 312 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 CA5BP1Q8WTZ4 195 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 PYROXD1Q8WU10 500 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 PHF10Q8WUB8 498 aaKnown RBP5.75□□□□□ -1.49
NUP88-212ENST00000576708 UCN3Q969E3 161 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 ANKRD9Q96BM1 317 aaPredicted RBP5.75□□□□□ -1.49
NUP88-212ENST00000576708 PPWD1Q96BP3 646 aaKnown RBP5.75□□□□□ -1.49
NUP88-212ENST00000576708 SERINC2Q96SA4 455 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 GPR22Q99680 433 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 RBBP8Q99708 897 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 NAPGQ99747 312 aaPredicted RBP5.75□□□□□ -1.49
NUP88-212ENST00000576708 CCDC77Q9BR77 488 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 ENKD1Q9H0I2 346 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 ALG9Q9H6U8 611 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 COPS7BQ9H9Q2 264 aaPredicted RBP5.75□□□□□ -1.49
NUP88-212ENST00000576708 GRPEL1Q9HAV7 217 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 POPDC3Q9HBV1 291 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 EMC7Q9NPA0 242 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 ADAP2Q9NPF8 381 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 PNPLA3Q9NST1 481 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 HPF1Q9NWY4 346 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 GPRC5BQ9NZH0 403 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 CD274Q9NZQ7 290 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 PTBP2Q9UKA9 531 aaKnown RBP5.75□□□□□ -1.49
NUP88-212ENST00000576708 DAPP1Q9UN19 280 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 YARS2Q9Y2Z4 477 aaKnown RBP5.75□□□□□ -1.49
NUP88-212ENST00000576708 SAR1BQ9Y6B6 198 aa5.75□□□□□ -1.49
NUP88-212ENST00000576708 DCHS2Q6V1P9 2916 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 ATP6AP2A0A1C7CYW4 349 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 TCRBV9S1A1TA0A576 114 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 LRRC14BA6NHZ5 514 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 FAM159BA6NKW6 160 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 C17orf105B2RV13 164 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 CCDC188H7C350 402 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 RAD51CO43502 376 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 RRP9O43818 475 aaKnown RBP5.74□□□□□ -1.49
NUP88-212ENST00000576708 FGF17O60258 216 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 ATP6AP2O75787 350 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 TOXO94900 526 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 LRATO95237 230 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 TUBB4AP04350 444 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 CCL3P10147 92 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 STMN1P16949 149 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 ATP5A1P25705 553 aaKnown RBP5.74□□□□□ -1.49
NUP88-212ENST00000576708 SSTR2P30874 369 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 PIGAP37287 484 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 GNALP38405 381 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 GP5P40197 560 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 PAFAH1B1P43034 410 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 MAGEA5P43359 124 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 DNASE1L1P49184 302 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 IRF8Q02556 426 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 C2orf54Q08AI8 447 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 PMPCAQ10713 525 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 ASPHQ12797 758 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 DDX39BQ13838 428 aaKnown RBP5.74□□□□□ -1.49
NUP88-212ENST00000576708 EFTUD2Q15029 972 aaKnown RBP eCLIP5.74□□□□□ -1.49
NUP88-212ENST00000576708 TERF2Q15554 542 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 ELAVL1Q15717 326 aaKnown RBP5.74□□□□□ -1.49
NUP88-212ENST00000576708 GXYLT1Q4G148 440 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 PRR31Q5SQ13 230 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 C1QTNF12Q5T7M4 302 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 ZNF585AQ6P3V2 769 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 C3orf62Q6ZUJ4 267 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 ISCA2Q86U28 154 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 C1QL4Q86Z23 238 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 CTAGE3PQ8IX95 158 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 TCAIMQ8N3R3 496 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 TMEM251Q8N6I4 163 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 PPM1NQ8N819 430 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 ACBD4Q8NC06 268 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 PDPRQ8NCN5 879 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 TTLQ8NG68 377 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 SLC2A12Q8TD20 617 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 ZNF473Q8WTR7 871 aaKnown RBP5.74□□□□□ -1.49
NUP88-212ENST00000576708 NRGNQ92686 78 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 KIAA1191Q96A73 305 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 FOXRED1Q96CU9 486 aaPredicted RBP5.74□□□□□ -1.49
NUP88-212ENST00000576708 WDR34Q96EX3 536 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 PTCD3Q96EY7 689 aaKnown RBP5.74□□□□□ -1.49
NUP88-212ENST00000576708 UBXN10Q96LJ8 280 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 C16orf92Q96LL3 132 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms