RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 TMEM45AQ9NWC5 275 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 TAS2R9Q9NYW1 312 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 STMN3Q9NZ72 180 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 ZNF639Q9UID6 485 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 ZNF223Q9UK11 482 aaPredicted RBP13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 LHX6Q9UPM6 363 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 PCDHGA9Q9Y5G4 932 aaKnown RBP13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 A0A087WV62 115 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 WWP2O00308 870 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 PRKNO60260 465 aaPredicted RBP13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 ANP32DO95626 131 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 CBX7O95931 251 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 FAM87AP0C7U9 286 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 S1PR1P21453 382 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 WNT3P56703 355 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 PHC1P78364 1004 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 ZNF155Q12901 538 aaPredicted RBP13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 MAPKAPK3Q16644 382 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 ACER2Q5QJU3 275 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 TCTN3Q6NUS6 607 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 H3F3CQ6NXT2 135 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 C9orf40Q8IXQ3 194 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 ZNF615Q8N8J6 731 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 NUP43Q8NFH3 380 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 C16orf52Q8NHV5 167 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 NUBPLQ8TB37 319 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 TM9SF4Q92544 642 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 TTC9Q92623 222 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 SPDL1Q96EA4 605 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 ABHD17AQ96GS6 310 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 PANX1Q96RD7 426 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 LMF1Q96S06 567 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 LIN28AQ9H9Z2 209 aaKnown RBP13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 SAR1AQ9NR31 198 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 ZCCHC3Q9NUD5 404 aaKnown RBP13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 BTNL2Q9UIR0 455 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 C19orf53Q9UNZ5 99 aaPredicted RBP13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 ZNF451Q9Y4E5 1061 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 HEMK1Q9Y5R4 338 aaPredicted RBP13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 NINQ8N4C6 2090 aa13.47□□□□□ -0.25
NPLOC4-218ENST00000574964 EXPH5Q8NEV8 1989 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 DYTNA2CJ06 578 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 ERVH48-1M5A8F1 160 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 UPK1AO00322 258 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 SHOX2O60902 331 aaPredicted RBP13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 SCN2BO60939 215 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 FAM107AO95990 144 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 CLPSP04118 112 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 IFI6P09912 130 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 SFTPCP11686 197 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 CCT3P49368 545 aaKnown RBP13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 MLF1P58340 268 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 HBA1P69905 142 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 MFAP5Q13361 173 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 UBAP2LQ14157 1087 aaKnown RBP13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 EBPQ15125 230 aaKnown RBP13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 ZNHIT3Q15649 155 aaPredicted RBP13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 C6orf10Q5SRN2 563 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 GKAP1Q5VSY0 366 aaPredicted RBP13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 BHLHB9Q6PI77 547 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 BLOC1S3Q6QNY0 202 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 GK5Q6ZS86 529 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 MSANTD1Q6ZTZ1 278 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 MTERF4Q7Z6M4 381 aaKnown RBP13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 PIGWQ7Z7B1 504 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 FUNDC1Q8IVP5 155 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 LGI4Q8N135 537 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 OR2L13Q8N349 312 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 TMEM156Q8N614 296 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 CPSF7Q8N684 471 aaKnown RBP13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 TRIML2Q8N7C3 387 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 SIMC1Q8NDZ2 872 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 C9orf43Q8TAL5 461 aaPredicted RBP13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 SLC22A8Q8TCC7 542 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 VPS33AQ96AX1 596 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 MOAP1Q96BY2 351 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 ITCHQ96J02 903 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 SMAD5Q99717 465 aaKnown RBP13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 WWTR1Q9GZV5 400 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 ZNF385DQ9H6B1 395 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 CXorf36Q9H7Y0 433 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 EQTNQ9NQ60 294 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 MYOTQ9UBF9 498 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 VPS4AQ9UN37 437 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 ARL2BPQ9Y2Y0 163 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 YARS2Q9Y2Z4 477 aaKnown RBP13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 PCDHGB7Q9Y5F8 929 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 CAPN7Q9Y6W3 813 aa13.46□□□□□ -0.25
NPLOC4-218ENST00000574964 RFXANKO14593 260 aa13.45□□□□□ -0.26
NPLOC4-218ENST00000574964 ANGPT2O15123 496 aa13.45□□□□□ -0.26
NPLOC4-218ENST00000574964 ITGA10O75578 1167 aa13.45□□□□□ -0.26
NPLOC4-218ENST00000574964 SNRPB2P08579 225 aaKnown RBP13.45□□□□□ -0.26
NPLOC4-218ENST00000574964 ADSLP30566 484 aaPredicted RBP13.45□□□□□ -0.26
NPLOC4-218ENST00000574964 SOX18P35713 384 aa13.45□□□□□ -0.26
NPLOC4-218ENST00000574964 SOX11P35716 441 aa13.45□□□□□ -0.26
NPLOC4-218ENST00000574964 CASRP41180 1078 aa13.45□□□□□ -0.26
NPLOC4-218ENST00000574964 PRIM2P49643 509 aa13.45□□□□□ -0.26
NPLOC4-218ENST00000574964 EMDP50402 254 aa13.45□□□□□ -0.26
NPLOC4-218ENST00000574964 SSR4P51571 173 aa13.45□□□□□ -0.26
NPLOC4-218ENST00000574964 NR0B1P51843 470 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms