RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 SRFP11831 508 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 NR4A1P22736 598 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 CTSKP43235 329 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 MASP1P48740 699 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 XKP51811 444 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 OLR1P78380 273 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 SIM1P81133 766 aaPredicted RBP13.21□□□□□ -0.3
VPS33B-208ENST00000574755 PIN1Q13526 163 aaPredicted RBP13.21□□□□□ -0.3
VPS33B-208ENST00000574755 DGCR6Q14129 220 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 SEC23BQ15437 767 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 SYT13Q7L8C5 426 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 BAHD1Q8TBE0 780 aaPredicted RBP13.21□□□□□ -0.3
VPS33B-208ENST00000574755 RLN3Q8WXF3 142 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 FKBP10Q96AY3 582 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 SMIM10Q96HG1 83 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 COPS4Q9BT78 406 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 QRSL1Q9H0R6 528 aaKnown RBP13.21□□□□□ -0.3
VPS33B-208ENST00000574755 AMBNQ9NP70 447 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 ACOT13Q9NPJ3 140 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 C2orf42Q9NWW7 574 aa13.21□□□□□ -0.3
VPS33B-208ENST00000574755 USP34Q70CQ2 3546 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 ZNF860A6NHJ4 632 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 H0YGG7 62 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 FAAHO00519 579 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 NME6O75414 186 aaPredicted RBP13.2□□□□□ -0.3
VPS33B-208ENST00000574755 ADAP00813 363 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 CHRNB1P11230 501 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 PSMB9P28065 219 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 POU1F1P28069 291 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 STT3AP46977 705 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 LSSP48449 732 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 SMIM11AP58511 58 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 CDC42P60953 191 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 ARF3P61204 181 aaPredicted RBP13.2□□□□□ -0.3
VPS33B-208ENST00000574755 HHEXQ03014 270 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 MVKQ03426 396 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 SMAD4Q13485 552 aaKnown RBP13.2□□□□□ -0.3
VPS33B-208ENST00000574755 RUNX2Q13950 521 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 LEXMQ3ZCV2 418 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 TMEM236Q5W0B7 351 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 DHRS4L2Q6PKH6 230 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 OR4N5Q8IXE1 308 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 SAMD14Q8IZD0 417 aaPredicted RBP13.2□□□□□ -0.3
VPS33B-208ENST00000574755 NLGN4XQ8N0W4 816 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 FAM160A2Q8N612 972 aaPredicted RBP13.2□□□□□ -0.3
VPS33B-208ENST00000574755 OR4K14Q8NGD5 310 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 DHRS1Q96LJ7 313 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 PHF7Q9BWX1 381 aaPredicted RBP13.2□□□□□ -0.3
VPS33B-208ENST00000574755 TPSD1Q9BZJ3 242 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 MS4A12Q9NXJ0 267 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 ENPP5Q9UJA9 477 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 ACAD8Q9UKU7 415 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 A4GNTQ9UNA3 340 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 DUSP12Q9UNI6 340 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 A0A0J9YY10 115 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 A0A1W2PPC4 97 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 M0R129 80 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 ZSCAN9O15535 394 aaPredicted RBP13.2□□□□□ -0.3
VPS33B-208ENST00000574755 ASNA1O43681 348 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 TPST2O60704 377 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 DNAJB6O75190 326 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 OXSR1O95747 527 aaPredicted RBP13.2□□□□□ -0.3
VPS33B-208ENST00000574755 ALOX12P18054 663 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 CHMP24386 653 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 CRISP1P54107 249 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 ATAD3BQ5T9A4 648 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 FAM111BQ6SJ93 734 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 SLC16A12Q6ZSM3 486 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 C16orf62Q7Z3J2 963 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 WDR53Q7Z5U6 358 aaPredicted RBP13.2□□□□□ -0.3
VPS33B-208ENST00000574755 ZNF655Q8N720 491 aaPredicted RBP13.2□□□□□ -0.3
VPS33B-208ENST00000574755 FAM46DQ8NEK8 389 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 TSTD1Q8NFU3 115 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 SLC7A13Q8TCU3 470 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 GAB3Q8WWW8 586 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 KLHDC7BQ96G42 594 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 ACTRT3Q9BYD9 372 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 ZNF226Q9NYT6 803 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 MGAT4BQ9UQ53 548 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 SLCO1B1Q9Y6L6 691 aa13.2□□□□□ -0.3
VPS33B-208ENST00000574755 KNL1Q8NG31 2342 aa13.19□□□□□ -0.3
VPS33B-208ENST00000574755 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.19□□□□□ -0.3
VPS33B-208ENST00000574755 CASC3O15234 703 aaKnown RBP13.19□□□□□ -0.3
VPS33B-208ENST00000574755 TNRC18O15417 2968 aaPredicted RBP13.19□□□□□ -0.3
VPS33B-208ENST00000574755 EPPINO95925 133 aa13.19□□□□□ -0.3
VPS33B-208ENST00000574755 LGI1O95970 557 aa13.19□□□□□ -0.3
VPS33B-208ENST00000574755 BCL10O95999 233 aa13.19□□□□□ -0.3
VPS33B-208ENST00000574755 POU3F3P20264 500 aaPredicted RBP13.19□□□□□ -0.3
VPS33B-208ENST00000574755 BLKP51451 505 aa13.19□□□□□ -0.3
VPS33B-208ENST00000574755 NUDT6P53370 316 aa13.19□□□□□ -0.3
VPS33B-208ENST00000574755 PPP1CAP62136 330 aa13.19□□□□□ -0.3
VPS33B-208ENST00000574755 C6orf132Q5T0Z8 1188 aa13.19□□□□□ -0.3
VPS33B-208ENST00000574755 FAM92BQ6ZTR7 304 aa13.19□□□□□ -0.3
VPS33B-208ENST00000574755 PRSS41Q7RTY9 318 aa13.19□□□□□ -0.3
VPS33B-208ENST00000574755 PARGQ86W56 976 aa13.19□□□□□ -0.3
VPS33B-208ENST00000574755 OOSP2Q86WS3 158 aa13.19□□□□□ -0.3
VPS33B-208ENST00000574755 ANKRD13BQ86YJ7 626 aa13.19□□□□□ -0.3
VPS33B-208ENST00000574755 OR7G2Q8NG99 324 aa13.19□□□□□ -0.3
VPS33B-208ENST00000574755 OR6T1Q8NGN1 323 aa13.19□□□□□ -0.3
VPS33B-208ENST00000574755 ADAMTS15Q8TE58 950 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms