RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 OR1E2P47887 323 aa26.66■■□□□ 1.86
CTDNEP1-210ENST00000574322 HMGA2P52926 109 aa26.66■■□□□ 1.86
CTDNEP1-210ENST00000574322 PUM1Q14671 1186 aaKnown RBP eCLIP26.66■■□□□ 1.866e-18■■□□□ 12.7
CTDNEP1-210ENST00000574322 ANKRD34AQ69YU3 496 aa26.66■■□□□ 1.86
CTDNEP1-210ENST00000574322 FAHD1Q6P587 224 aa26.66■■□□□ 1.86
CTDNEP1-210ENST00000574322 CYP4Z1Q86W10 505 aa26.66■■□□□ 1.86
CTDNEP1-210ENST00000574322 OR4N5Q8IXE1 308 aa26.66■■□□□ 1.86
CTDNEP1-210ENST00000574322 OR9A4Q8NGU2 314 aa26.66■■□□□ 1.86
CTDNEP1-210ENST00000574322 NCSTNQ92542 709 aa26.66■■□□□ 1.86
CTDNEP1-210ENST00000574322 SPATA5L1Q9BVQ7 753 aa26.66■■□□□ 1.86
CTDNEP1-210ENST00000574322 AMBRA1Q9C0C7 1298 aa26.66■■□□□ 1.86
CTDNEP1-210ENST00000574322 EXD2Q9NVH0 621 aa26.66■■□□□ 1.86
CTDNEP1-210ENST00000574322 PDP1Q9P0J1 537 aaPredicted RBP26.66■■□□□ 1.86
CTDNEP1-210ENST00000574322 ORC6Q9Y5N6 252 aa26.66■■□□□ 1.86
CTDNEP1-210ENST00000574322 CACNA1EQ15878 2313 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 TRIM64A6NGJ6 449 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 DUXAA6NLW8 204 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 SLC16A6O15403 523 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 CHST10O43529 356 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 RDH16O75452 317 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 RHCEP18577 417 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 ALDH4A1P30038 563 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 MPLP40238 635 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 DAPP51397 102 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 APOFQ13790 326 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 FHL5Q5TD97 284 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 ZNF605Q86T29 641 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 TTC29Q8NA56 475 aaPredicted RBP26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 OR4C15Q8NGM1 316 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 CEP76Q8TAP6 659 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 ZNF675Q8TD23 568 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 RMND5BQ96G75 393 aaPredicted RBP26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 PIP5K1AQ99755 562 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 MRPS26Q9BYN8 205 aaKnown RBP26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 SOX17Q9H6I2 414 aaPredicted RBP26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 DDX18Q9NVP1 670 aaKnown RBP26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 C19orf53Q9UNZ5 99 aaPredicted RBP26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 SH3GLB1Q9Y371 365 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 NSA2O95478 260 aaKnown RBP26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 AGR2O95994 175 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 IFNW1P05000 195 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 GPLD1P80108 840 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 KCNAB2Q13303 367 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 KCTD21Q4G0X4 260 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 MFSD12Q6NUT3 480 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 KANSL1Q7Z3B3 1105 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 ADAMTS18Q8TE60 1221 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 ANKRD9Q96BM1 317 aaPredicted RBP26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 ZNF354BQ96LW1 612 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 YTHDF1Q9BYJ9 559 aaKnown RBP26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 CALML5Q9NZT1 146 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 GMEB2Q9UKD1 530 aa26.65■■□□□ 1.86
CTDNEP1-210ENST00000574322 PCDH15Q96QU1 1955 aa26.64■■□□□ 1.86
CTDNEP1-210ENST00000574322 PLOD3O60568 738 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 JRKO75564 520 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 MED26O95402 600 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 CLIC3O95833 236 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 CFIP05156 583 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 CHRM4P08173 479 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 ITGAMP11215 1152 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 IGFBP5P24593 272 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 OR1D5P58170 312 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 EXOSC6Q5RKV6 272 aaKnown RBP26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 NKAIN2Q5VXU1 208 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 HEPHL1Q6MZM0 1159 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 CDC73Q6P1J9 531 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 FAM111BQ6SJ93 734 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 PIK3C3Q8NEB9 887 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 ZNF555Q8NEP9 628 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 PROX1Q92786 737 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 COL26A1Q96A83 441 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 AHCYL2Q96HN2 611 aaKnown RBP26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 COL21A1Q96P44 957 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 TRNT1Q96Q11 434 aaKnown RBP26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 YIPF4Q9BSR8 244 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 GIN1Q9NXP7 522 aa26.64■■□□□ 1.85
CTDNEP1-210ENST00000574322 HYKKA2RU49 373 aa26.63■■□□□ 1.85
CTDNEP1-210ENST00000574322 A8MVJ9 347 aa26.63■■□□□ 1.85
CTDNEP1-210ENST00000574322 FAM227AF5H4B4 570 aa26.63■■□□□ 1.85
CTDNEP1-210ENST00000574322 IL18R1Q13478 541 aa26.63■■□□□ 1.85
CTDNEP1-210ENST00000574322 PLXDC1Q8IUK5 500 aa26.63■■□□□ 1.85
CTDNEP1-210ENST00000574322 MUS81Q96NY9 551 aa26.63■■□□□ 1.85
CTDNEP1-210ENST00000574322 SOHLH2Q9NX45 425 aa26.63■■□□□ 1.85
CTDNEP1-210ENST00000574322 NLGN3Q9NZ94 848 aa26.63■■□□□ 1.85
CTDNEP1-210ENST00000574322 SEC14L3Q9UDX4 400 aa26.63■■□□□ 1.85
CTDNEP1-210ENST00000574322 KCND3Q9UK17 655 aa26.63■■□□□ 1.85
CTDNEP1-210ENST00000574322 MN1Q10571 1320 aaPredicted RBP26.63■■□□□ 1.85
CTDNEP1-210ENST00000574322 DSPPQ9NZW4 1301 aa26.63■■□□□ 1.85
CTDNEP1-210ENST00000574322 TNFRSF11BO00300 401 aa26.62■■□□□ 1.85
CTDNEP1-210ENST00000574322 B4GAT1O43505 415 aa26.62■■□□□ 1.85
CTDNEP1-210ENST00000574322 DUX1O43812 170 aa26.62■■□□□ 1.85
CTDNEP1-210ENST00000574322 LDB3O75112 727 aa26.62■■□□□ 1.85
CTDNEP1-210ENST00000574322 RNH1P13489 461 aaKnown RBP26.62■■□□□ 1.85
CTDNEP1-210ENST00000574322 LIMS1P48059 325 aa26.62■■□□□ 1.85
CTDNEP1-210ENST00000574322 MAPK10P53779 464 aa26.62■■□□□ 1.85
CTDNEP1-210ENST00000574322 TTC33Q6PID6 262 aaPredicted RBP26.62■■□□□ 1.85
CTDNEP1-210ENST00000574322 SHISA5Q8N114 240 aa26.62■■□□□ 1.85
CTDNEP1-210ENST00000574322 OR6C4Q8NGE1 309 aa26.62■■□□□ 1.85
CTDNEP1-210ENST00000574322 PSD2Q9BQI7 771 aa26.62■■□□□ 1.85
CTDNEP1-210ENST00000574322 ANKRA2Q9H9E1 313 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms