RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	NME5	P56597	212 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	IGLV3-21	P80748	117 aa	Predicted RBP	13.37	□□□□□ -0.27
ABR-223	ENST00000573895	MRPL49	Q13405	166 aa	Known RBP	13.37	□□□□□ -0.27
ABR-223	ENST00000573895	ELOA	Q14241	798 aa	Known RBP	13.37	□□□□□ -0.27
ABR-223	ENST00000573895	FCRLB	Q6BAA4	426 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	CAMKMT	Q7Z624	323 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	TREML1	Q86YW5	311 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	FUNDC1	Q8IVP5	155 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	MORN4	Q8NDC4	146 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	MDS2	Q8NDY4	140 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	OR14A16	Q8NHC5	309 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	TANK	Q92844	425 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	DAZL	Q92904	295 aa	Known RBP	13.37	□□□□□ -0.27
ABR-223	ENST00000573895	COQ8B	Q96D53	544 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	ALOXE3	Q9BYJ1	711 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	DEFB126	Q9BYW3	111 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	CDCP1	Q9H5V8	836 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	WDR41	Q9HAD4	459 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	PNO1	Q9NRX1	252 aa	Known RBP	13.37	□□□□□ -0.27
ABR-223	ENST00000573895	OLAH	Q9NV23	265 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	ATAD3A	Q9NVI7	634 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	TAS2R7	Q9NYW3	318 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	PSME2	Q9UL46	239 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	NDUFAF1	Q9Y375	327 aa		13.37	□□□□□ -0.27
ABR-223	ENST00000573895	DIDO1	Q9BTC0	2240 aa	Known RBP	13.36	□□□□□ -0.27
ABR-223	ENST00000573895	ICE1	Q9Y2F5	2266 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	LOC100653049	A0A140TA62	436 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895		A0A1W2PP18	115 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	C1orf226	A1L170	272 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	GABRR3	A8MPY1	467 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	BBIP1	A8MTZ0	92 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	CFLAR	O15519	480 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	KRT34	O76011	436 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	RASAL1	O95294	804 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	F10	P00742	488 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	CRYAB	P02511	175 aa	Known RBP	13.36	□□□□□ -0.27
ABR-223	ENST00000573895	CD46	P15529	392 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	DDC	P20711	480 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	CALB2	P22676	271 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	CPN2	P22792	545 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	S100A3	P33764	101 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	CD96	P40200	585 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	BUD31	P41223	144 aa	Predicted RBP	13.36	□□□□□ -0.27
ABR-223	ENST00000573895	MLF1	P58340	268 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	LRRC74A	Q0VAA2	488 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	STX4	Q12846	297 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	BNIP1	Q12981	228 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	PDE7A	Q13946	482 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	RCAN2	Q14206	197 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	ZSCAN26	Q16670	478 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.36	□□□□□ -0.27
ABR-223	ENST00000573895	ZNF766	Q5HY98	468 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	COQ5	Q5HYK3	327 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	CPTP	Q5TA50	214 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	MSANTD1	Q6ZTZ1	278 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	CCDC121	Q6ZUS5	278 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	YTHDF3	Q7Z739	585 aa	Known RBP	13.36	□□□□□ -0.27
ABR-223	ENST00000573895	KIF2B	Q8N4N8	673 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	VPS37A	Q8NEZ2	397 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	OR8J2	Q8NGG1	315 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	CLHC1	Q8NHS4	586 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	SPDL1	Q96EA4	605 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	SCMH1	Q96GD3	660 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	TEX37	Q96LM6	180 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	TAAR6	Q96RI8	345 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	EFCAB1	Q9HAE3	211 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	ARL8B	Q9NVJ2	186 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	FBXW2	Q9UKT8	454 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	PCDHA9	Q9Y5H5	950 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895	CLCA3P	Q9Y6N3	262 aa		13.36	□□□□□ -0.27
ABR-223	ENST00000573895		A0A1W2PR48	441 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	CCDC154	A6NI56	674 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895		A8MUA0	341 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	SCAMP2	O15127	329 aa	Known RBP	13.35	□□□□□ -0.27
ABR-223	ENST00000573895	AKAP10	O43572	662 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	ZFAND5	O76080	213 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	UBOX5	O94941	541 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	IL3	P08700	152 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	COX7A2	P14406	83 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	IL12A	P29459	219 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	ZFP36L2	P47974	494 aa	Known RBP	13.35	□□□□□ -0.27
ABR-223	ENST00000573895	CYB561	P49447	251 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	RASSF2	P50749	326 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	HNRNPH2	P55795	449 aa	Known RBP	13.35	□□□□□ -0.27
ABR-223	ENST00000573895	TNFRSF17	Q02223	184 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	OR1C1	Q15619	314 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	NDUFAF5	Q5TEU4	345 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	ANXA8L1	Q5VT79	327 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	SNX32	Q86XE0	403 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.35	□□□□□ -0.27
ABR-223	ENST00000573895	KRTCAP2	Q8N6L1	136 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	TMEM178A	Q8NBL3	297 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	PCYOX1L	Q8NBM8	494 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	OR9I1	Q8NGQ6	314 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	OR8K3	Q8NH51	312 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	CDC26	Q8NHZ8	85 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	PRR7	Q8TB68	274 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	PTPMT1	Q8WUK0	201 aa	Predicted RBP	13.35	□□□□□ -0.27
ABR-223	ENST00000573895	NR4A3	Q92570	626 aa		13.35	□□□□□ -0.27
ABR-223	ENST00000573895	NCLN	Q969V3	563 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms