RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 HMGCS1Q01581 520 aa15.9■□□□□ 0.14
SMG6-212ENST00000573153 TFF3Q07654 80 aa15.9■□□□□ 0.14
SMG6-212ENST00000573153 CEBPEQ15744 281 aa15.9■□□□□ 0.14
SMG6-212ENST00000573153 LIPMQ5VYY2 423 aa15.9■□□□□ 0.14
SMG6-212ENST00000573153 SLC22A10Q63ZE4 541 aa15.9■□□□□ 0.14
SMG6-212ENST00000573153 BICRALQ6AI39 1079 aa15.9■□□□□ 0.14
SMG6-212ENST00000573153 DESI1Q6ICB0 168 aa15.9■□□□□ 0.14
SMG6-212ENST00000573153 TRIM46Q7Z4K8 759 aa15.9■□□□□ 0.14
SMG6-212ENST00000573153 TRABD2AQ86V40 505 aa15.9■□□□□ 0.14
SMG6-212ENST00000573153 SLC22A16Q86VW1 577 aa15.9■□□□□ 0.14
SMG6-212ENST00000573153 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.9■□□□□ 0.14
SMG6-212ENST00000573153 ROPN1BQ9BZX4 212 aaPredicted RBP15.9■□□□□ 0.14
SMG6-212ENST00000573153 NXF5Q9H1B4 397 aaKnown RBP15.9■□□□□ 0.14
SMG6-212ENST00000573153 UBQLN3Q9H347 655 aa15.9■□□□□ 0.14
SMG6-212ENST00000573153 ROPN1Q9HAT0 212 aaPredicted RBP15.9■□□□□ 0.14
SMG6-212ENST00000573153 PLLPQ9Y342 182 aa15.9■□□□□ 0.14
SMG6-212ENST00000573153 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.9■□□□□ 0.14
SMG6-212ENST00000573153 PHF3Q92576 2039 aaKnown RBP15.9■□□□□ 0.14
SMG6-212ENST00000573153 C2orf92A0A1B0GVN3 265 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 ANKRD33BA6NCL7 494 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 SMIM23A6NLE4 172 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 NPIPB8E9PQR5 432 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 AQP7O14520 342 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 PCDH7O60245 1069 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 SLU7O95391 586 aaKnown RBP15.89■□□□□ 0.13
SMG6-212ENST00000573153 P04436 131 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 IGFBP2P18065 325 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 SERPINB3P29508 390 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 TIA1P31483 386 aaKnown RBP eCLIP15.89■□□□□ 0.13
SMG6-212ENST00000573153 FEN1P39748 380 aaKnown RBP15.89■□□□□ 0.13
SMG6-212ENST00000573153 PTGDSP41222 190 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 SMSP52788 366 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 FBXW4P57775 412 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 PLGLB1Q02325 96 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 ACSM2AQ08AH3 577 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 GXYLT1Q4G148 440 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 ACSM2BQ68CK6 577 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 RNF165Q6ZSG1 346 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 C4orf33Q8N1A6 199 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 BANPQ8N9N5 519 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 SPPL2AQ8TCT8 520 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 APOPT1Q96IL0 206 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 METTL2AQ96IZ6 378 aaKnown RBP15.89■□□□□ 0.13
SMG6-212ENST00000573153 TRMOQ9BU70 441 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 ITPAQ9BY32 194 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 ENKD1Q9H0I2 346 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 EHD3Q9NZN3 535 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 CNIH4Q9P003 139 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 EXO1Q9UQ84 846 aaKnown RBP15.89■□□□□ 0.13
SMG6-212ENST00000573153 CCL27Q9Y4X3 112 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 PKDREJQ9NTG1 2253 aa15.89■□□□□ 0.13
SMG6-212ENST00000573153 OR14I1A6ND48 311 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 NPIPA2E9PIF3 369 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 NPIPA3F8WFD2 350 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 ACOT7O00154 380 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 IL3P08700 152 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 NT5EP21589 574 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 DEKP35659 375 aaKnown RBP15.88■□□□□ 0.13
SMG6-212ENST00000573153 EMDP50402 254 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 NUP107P57740 925 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 PCLAFQ15004 111 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 EXOSC7Q15024 291 aaKnown RBP15.88■□□□□ 0.13
SMG6-212ENST00000573153 RPS6KA2Q15349 733 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 TRMT12Q53H54 448 aaKnown RBP15.88■□□□□ 0.13
SMG6-212ENST00000573153 ZNF628Q5EBL2 1059 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 CFAP157Q5JU67 520 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 C6orf163Q5TEZ5 329 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 SCIMPQ6UWF3 145 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 HOMEZQ8IX15 550 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 MCEMP1Q8IX19 187 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 SAMD14Q8IZD0 417 aaPredicted RBP15.88■□□□□ 0.13
SMG6-212ENST00000573153 TAGAPQ8N103 731 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 VWA5B2Q8N398 1253 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 MREGQ8N565 214 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 ADCY4Q8NFM4 1077 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 OR2W6PQ8NHA6 318 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 FAM76AQ8TAV0 307 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 ZNF675Q8TD23 568 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 HGDQ93099 445 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 KLHL29Q96CT2 875 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 ERP27Q96DN0 273 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 SMC6Q96SB8 1091 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 SECISBP2Q96T21 854 aaKnown RBP15.88■□□□□ 0.13
SMG6-212ENST00000573153 TMEM109Q9BVC6 243 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 TP63Q9H3D4 680 aaPredicted RBP15.88■□□□□ 0.13
SMG6-212ENST00000573153 ANKRA2Q9H9E1 313 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 ZFP64Q9NPA5 681 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 RNF6Q9Y252 685 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 CFL2Q9Y281 166 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 DLGAP4Q9Y2H0 992 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 WBP11Q9Y2W2 641 aaKnown RBP15.88■□□□□ 0.13
SMG6-212ENST00000573153 NPFFR2Q9Y5X5 522 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 NINQ8N4C6 2090 aa15.88■□□□□ 0.13
SMG6-212ENST00000573153 ATP6AP2A0A1C7CYW4 349 aa15.87■□□□□ 0.13
SMG6-212ENST00000573153 B4DXG7 233 aa15.87■□□□□ 0.13
SMG6-212ENST00000573153 SUSD5O60279 629 aa15.87■□□□□ 0.13
SMG6-212ENST00000573153 ERAL1O75616 437 aaKnown RBP15.87■□□□□ 0.13
SMG6-212ENST00000573153 ATP6AP2O75787 350 aa15.87■□□□□ 0.13
SMG6-212ENST00000573153 UROSP10746 265 aa15.87■□□□□ 0.13
SMG6-212ENST00000573153 PCSK2P16519 638 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms