RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 DND1Q8IYX4 353 aaKnown RBP16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 RIBC1Q8N443 379 aaPredicted RBP16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 BANPQ8N9N5 519 aa16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 OR5M9Q8NGP3 310 aa16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 SMC6Q96SB8 1091 aa16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 EXO5Q9H790 373 aa16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 PROK2Q9HC23 129 aa16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 PLSCR2Q9NRY7 297 aa16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 CNIH4Q9P003 139 aa16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 BOKQ9UMX3 212 aaPredicted RBP16.35■□□□□ 0.21
CTDNEP1-207ENST00000572043 SERTM1A2A2V5 107 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 LRRC3CA6NJW4 275 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 CAPN14A8MX76 684 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 E9PLN8 166 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 H3BQF6 201 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 TP53I11O14683 189 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 TRIM13O60858 407 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 UROSP10746 265 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 HTR1EP28566 365 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 ZNF763Q0D2J5 394 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 ART3Q13508 389 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 SLC10A1Q14973 349 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 ZNF628Q5EBL2 1059 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 DESI1Q6ICB0 168 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 WDR93Q6P2C0 686 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 GALNT18Q6P9A2 607 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 TRIM46Q7Z4K8 759 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 TICAM1Q8IUC6 712 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 RPRMLQ8N4K4 120 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 SPPL2AQ8TCT8 520 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 CAVIN3Q969G5 261 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 C11orf24Q96F05 449 aaPredicted RBP16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 VKORC1Q9BQB6 163 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 ZFP64Q9NPA5 681 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 RRAGDQ9NQL2 400 aaPredicted RBP16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 SLC35C2Q9NQQ7 365 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 PNPLA3Q9NST1 481 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 GIMAP4Q9NUV9 329 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 EHD3Q9NZN3 535 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 ZNF639Q9UID6 485 aa16.34■□□□□ 0.21
CTDNEP1-207ENST00000572043 PTPN13Q12923 2485 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 LRRK2Q5S007 2527 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 RSL1D1O76021 490 aaKnown RBP16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 SNRPB2P08579 225 aaKnown RBP16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 CREB1P16220 341 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 ABCD3P28288 659 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 MAN2A2P49641 1150 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 TMED10P49755 219 aaKnown RBP16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 PRSS53Q2L4Q9 553 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 ZNF585AQ6P3V2 769 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 XKRXQ6PP77 449 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 TRILQ7L0X0 811 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 EID3Q8N140 333 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 TCP10LQ8TDR4 215 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 CTHRC1Q96CG8 243 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 DMRTA2Q96SC8 542 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 PARD6BQ9BYG5 372 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 ZNF703Q9H7S9 590 aaPredicted RBP16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 MKS1Q9NXB0 559 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 SENP1Q9P0U3 644 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 PRODH2Q9UF12 536 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 LGALS13Q9UHV8 139 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 CFL2Q9Y281 166 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 POLEQ07864 2286 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 HIVEP3Q5T1R4 2406 aa16.33■□□□□ 0.2
CTDNEP1-207ENST00000572043 TMEM233B4DJY2 109 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 AZIN1O14977 448 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 SEC22BO75396 215 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 CHRNGP07510 517 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 DDCP20711 480 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 MASP1P48740 699 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 TRPC1P48995 793 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 EMDP50402 254 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 PLCXD2Q0VAA5 305 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 HYAL4Q2M3T9 481 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 GXYLT1Q4G148 440 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 EMC4Q5J8M3 183 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 TMEM198Q66K66 360 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 NOXRED1Q6NXP6 359 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 ZCCHC23Q6ZST2 131 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 FAM9CQ8IZT9 166 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 MARVELD2Q8N4S9 558 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 AGR3Q8TD06 166 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 MARVELD3Q96A59 401 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 SDCCAG3Q96C92 435 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 OMA1Q96E52 524 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 LCORQ96JN0 433 aaPredicted RBP16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 ZNF597Q96LX8 424 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 RILPQ96NA2 401 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 BBS4Q96RK4 519 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 ROPN1BQ9BZX4 212 aaPredicted RBP16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 SLC6A15Q9H2J7 730 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 TP63Q9H3D4 680 aaPredicted RBP16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 ROPN1Q9HAT0 212 aaPredicted RBP16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 MIEF1Q9NQG6 463 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 SIRT5Q9NXA8 310 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 ALKBH4Q9NXW9 302 aa16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 KLF2Q9Y5W3 355 aaPredicted RBP16.32■□□□□ 0.2
CTDNEP1-207ENST00000572043 RP1L1Q8IWN7 2480 aaPredicted RBP16.31■□□□□ 0.2
CTDNEP1-207ENST00000572043 ICE1Q9Y2F5 2266 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms