RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 LAPTM5Q13571 262 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 MORF4L2Q15014 288 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 SETDB1Q15047 1291 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 TBCCQ15814 346 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 KBTBD12Q3ZCT8 623 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 NHSL2Q5HYW2 709 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 HLA-DQA1Q5Y7H0 255 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 ANKRD34AQ69YU3 496 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 OR5M10Q6IEU7 315 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 MRM1Q6IN84 353 aaKnown RBP13.49□□□□□ -0.25
USB1-214ENST00000568848 GRHL2Q6ISB3 625 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 LRRC70Q7Z2Q7 622 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 PACS2Q86VP3 889 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 TRIM42Q8IWZ5 723 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 ZBED8Q8IZ13 594 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 SRFBP1Q8NEF9 429 aaKnown RBP13.49□□□□□ -0.25
USB1-214ENST00000568848 OR1J4Q8NGS1 313 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 NANOS1Q8WY41 292 aaKnown RBP13.49□□□□□ -0.25
USB1-214ENST00000568848 HGDQ93099 445 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 CCL19Q99731 98 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 ITPAQ9BY32 194 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 OPN3Q9H1Y3 402 aaPredicted RBP13.49□□□□□ -0.25
USB1-214ENST00000568848 OR10A5Q9H207 317 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 ANKRA2Q9H9E1 313 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 CALHM2Q9HA72 323 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 CLCF1Q9UBD9 225 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 PHF11Q9UIL8 331 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 FBXL2Q9UKC9 423 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 SAR1BQ9Y6B6 198 aa13.49□□□□□ -0.25
USB1-214ENST00000568848 RAI1Q7Z5J4 1906 aaPredicted RBP13.49□□□□□ -0.25
USB1-214ENST00000568848 IL18BPO95998 194 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 S100BP04271 92 aaPredicted RBP13.48□□□□□ -0.25
USB1-214ENST00000568848 FAM58BPP0C7Q3 252 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 GPX3P22352 226 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 ARL4CP56559 192 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 IRF9Q00978 393 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 POU4F1Q01851 419 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 CBLBQ13191 982 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 RCAN2Q14206 197 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 E2F2Q14209 437 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 TBCELQ5QJ74 424 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 C17orf53Q8N3J3 647 aaPredicted RBP13.48□□□□□ -0.25
USB1-214ENST00000568848 ZCCHC7Q8N3Z6 543 aaKnown RBP13.48□□□□□ -0.25
USB1-214ENST00000568848 WDSUB1Q8N9V3 476 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 OR14L1PQ8NHC6 308 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 NTNG2Q96CW9 530 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 TMEM41AQ96HV5 264 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 CDK15Q96Q40 435 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 POPDC3Q9HBV1 291 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 SNX15Q9NRS6 342 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.48□□□□□ -0.25
USB1-214ENST00000568848 OPTCQ9UBM4 332 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 EIF3LQ9Y262 564 aaKnown RBP13.48□□□□□ -0.25
USB1-214ENST00000568848 SNX24Q9Y343 169 aa13.48□□□□□ -0.25
USB1-214ENST00000568848 A0A1W2PNV4 684 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 SYNDIG1LA6NDD5 238 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 OR6C76A6NM76 312 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 A8MXE2 369 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 K7EPI3 171 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 PLOD2O00469 737 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 CASKO14936 926 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 ARHGEF9O43307 516 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 CTIFO43310 598 aaKnown RBP13.47□□□□□ -0.25
USB1-214ENST00000568848 ICOSLGO75144 302 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 UGT2B11O75310 529 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 RCBTB2O95199 551 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 SNX4O95219 450 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 SLC35E2BP0CK96 405 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 SLC35E2P0CK97 266 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 S1PR1P21453 382 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 LOXP28300 417 aaPredicted RBP13.47□□□□□ -0.25
USB1-214ENST00000568848 BUD31P41223 144 aaPredicted RBP13.47□□□□□ -0.25
USB1-214ENST00000568848 KRTAP1-1Q07627 177 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 PCDH1Q08174 1060 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 FRG1Q14331 258 aaKnown RBP13.47□□□□□ -0.25
USB1-214ENST00000568848 LTB4RQ15722 352 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 CPSF6Q16630 551 aaKnown RBP eCLIP13.47□□□□□ -0.25
USB1-214ENST00000568848 ZNF474Q6S9Z5 364 aaPredicted RBP13.47□□□□□ -0.25
USB1-214ENST00000568848 CYP20A1Q6UW02 462 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 ISCA2Q86U28 154 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 GALNT12Q8IXK2 581 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 DND1Q8IYX4 353 aaKnown RBP13.47□□□□□ -0.25
USB1-214ENST00000568848 CNEP1R1Q8N9A8 125 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 ADCY4Q8NFM4 1077 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 ZPLD1Q8TCW7 415 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 SMPDL3BQ92485 455 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 ISL2Q96A47 359 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 OMA1Q96E52 524 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 ATOH8Q96SQ7 321 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 SFXN3Q9BWM7 321 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 OSBPL11Q9BXB4 747 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 KLRF1Q9NZS2 232 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 RNF11Q9Y3C5 154 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 NBEAL1Q6ZS30 2694 aa13.47□□□□□ -0.25
USB1-214ENST00000568848 PPM1BO75688 479 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 SEC31AO94979 1220 aaKnown RBP13.46□□□□□ -0.25
USB1-214ENST00000568848 PLAUP00749 431 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 STMN1P16949 149 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 TLX1P31314 330 aaPredicted RBP13.46□□□□□ -0.25
USB1-214ENST00000568848 LHX2P50458 406 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms