RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 CCDC63Q8NA47 563 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 OR2T11Q8NH01 316 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 RNF138Q8WVD3 245 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 HSPBAP1Q96EW2 488 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 ZIM3Q96PE6 472 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 CCT7Q99832 543 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 MECRQ9BV79 373 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 CNPPD1Q9BV87 410 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 STMN4Q9H169 189 aaPredicted RBP7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 IL1RL2Q9HB29 575 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 SACM1LQ9NTJ5 587 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 C1orf109Q9NX04 203 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 QPCTLQ9NXS2 382 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 NTMQ9P121 344 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 ERVK-11Q9UQG0 969 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 GPR55Q9Y2T6 319 aaPredicted RBP7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 TMED5Q9Y3A6 229 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 TRAF6Q9Y4K3 522 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 NPFFR2Q9Y5X5 522 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 ZNF780BQ9Y6R6 833 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 A0A0G2JMM0 328 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 A0A1W2PPB8 328 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 GNG14A0A1W2PPG7 69 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 A0A1W2PRS3 328 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 KIR3DP1A8MWS1 328 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 CAPN14A8MX76 684 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 NPIPA5E9PKD4 350 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 ADAM10O14672 748 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 ACOX3O15254 700 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 CTIFO43310 598 aaKnown RBP7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 RGS14O43566 566 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 SUSD5O60279 629 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 SLC19A2O60779 497 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 TRIM3O75382 744 aaPredicted RBP7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 ERAL1O75616 437 aaKnown RBP7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 CLDN1O95832 211 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 ABCB1P08183 1280 aaPredicted RBP7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 CT45A8P0DMV1 189 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 CT45A9P0DMV2 189 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 NT5EP21589 574 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 MPIP34949 423 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 MAP3K8P41279 467 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 SERPINB4P48594 390 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 NR0B1P51843 470 aaKnown RBP7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 PER3P56645 1201 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 PSPHP78330 225 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 SRSF11Q05519 484 aaKnown RBP7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 MPP2Q14168 576 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 KRT71Q3SY84 523 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 RFTN2Q52LD8 501 aaPredicted RBP7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 CT45A2Q5DJT8 189 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 TBCELQ5QJ74 424 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 CRYBG3Q68DQ2 2970 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 MTFR2Q6P444 385 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 GK5Q6ZS86 529 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 DOLPP1Q86YN1 238 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 CCDC116Q8IYX3 515 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 SIMC1Q8NDZ2 872 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 OR52N2Q8NGI0 321 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 SPPL2AQ8TCT8 520 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 DOK4Q8TEW6 326 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 PHF10Q8WUB8 498 aaKnown RBP7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 HGDQ93099 445 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 KLHL29Q96CT2 875 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 LCORQ96JN0 433 aaPredicted RBP7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 EGLN2Q96KS0 407 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 VSTM2LQ96N03 204 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 BTBD9Q96Q07 612 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 DMRTA2Q96SC8 542 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 ANGPTL4Q9BY76 406 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 TTTY12Q9BZ98 90 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 IQCGQ9H095 443 aaKnown RBP7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 EML4Q9HC35 981 aaKnown RBP7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 PRM3Q9NNZ6 103 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 ACKR4Q9NPB9 350 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 PRODH2Q9UF12 536 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 ZDHHC2Q9UIJ5 367 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 NPIPA1Q9UND3 350 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 DTX4Q9Y2E6 619 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 HRH3Q9Y5N1 445 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 INTS1Q8N201 2190 aaKnown RBP7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 MED12Q93074 2177 aa7.53□□□□□ -1.2
HDGFL3-205ENST00000568129 MED12LQ86YW9 2145 aa7.52□□□□□ -1.2
HDGFL3-205ENST00000568129 DOCK7Q96N67 2140 aa7.52□□□□□ -1.2
HDGFL3-205ENST00000568129 PKDREJQ9NTG1 2253 aa7.52□□□□□ -1.21
HDGFL3-205ENST00000568129 OR14I1A6ND48 311 aa7.52□□□□□ -1.21
HDGFL3-205ENST00000568129 FRG2CA6NGY1 282 aa7.52□□□□□ -1.21
HDGFL3-205ENST00000568129 LRRC3CA6NJW4 275 aa7.52□□□□□ -1.21
HDGFL3-205ENST00000568129 E9PLN8 166 aa7.52□□□□□ -1.21
HDGFL3-205ENST00000568129 RGS16O15492 202 aaPredicted RBP7.52□□□□□ -1.21
HDGFL3-205ENST00000568129 HS6ST1O60243 411 aa7.52□□□□□ -1.21
HDGFL3-205ENST00000568129 HCN1O60741 890 aa7.52□□□□□ -1.21
HDGFL3-205ENST00000568129 SEC22BO75396 215 aa7.52□□□□□ -1.21
HDGFL3-205ENST00000568129 PPM1BO75688 479 aa7.52□□□□□ -1.21
HDGFL3-205ENST00000568129 SNX4O95219 450 aa7.52□□□□□ -1.21
HDGFL3-205ENST00000568129 P04436 131 aa7.52□□□□□ -1.21
HDGFL3-205ENST00000568129 PCSK2P16519 638 aa7.52□□□□□ -1.21
HDGFL3-205ENST00000568129 SDC1P18827 310 aa7.52□□□□□ -1.21
HDGFL3-205ENST00000568129 TACR1P25103 407 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms