RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 C16orf47Q6ZP98 133 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-222ENST00000568034 CPLX4Q7Z7G2 160 aa16.69■□□□□ 0.26
COMMD4-222ENST00000568034 NUBPLQ8TB37 319 aa16.69■□□□□ 0.26
COMMD4-222ENST00000568034 ABHD17AQ96GS6 310 aa16.69■□□□□ 0.26
COMMD4-222ENST00000568034 CCDC115Q96NT0 180 aa16.69■□□□□ 0.26
COMMD4-222ENST00000568034 SLC25A23Q9BV35 468 aa16.69■□□□□ 0.26
COMMD4-222ENST00000568034 NMUR2Q9GZQ4 415 aa16.69■□□□□ 0.26
COMMD4-222ENST00000568034 WWTR1Q9GZV5 400 aa16.69■□□□□ 0.26
COMMD4-222ENST00000568034 LIN28AQ9H9Z2 209 aaKnown RBP16.69■□□□□ 0.26
COMMD4-222ENST00000568034 NEUROD4Q9HD90 331 aa16.69■□□□□ 0.26
COMMD4-222ENST00000568034 TMEM45AQ9NWC5 275 aa16.69■□□□□ 0.26
COMMD4-222ENST00000568034 NTMQ9P121 344 aa16.69■□□□□ 0.26
COMMD4-222ENST00000568034 C19orf53Q9UNZ5 99 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-222ENST00000568034 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 ASPDHA6ND91 283 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 A8MUI8 341 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 ZNF354AO60765 605 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-222ENST00000568034 PRAMEF2O60811 474 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 CAPN3P20807 821 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 GPC1P35052 558 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 MLF1P58340 268 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 KCNAB2Q13303 367 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 TIGD2Q4W5G0 525 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 AGKQ53H12 422 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 ANXA8L1Q5VT79 327 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 AGAP7PQ5VUJ5 663 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 TCTN3Q6NUS6 607 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 IGFL2Q6UWQ7 119 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 LGI4Q8N135 537 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 SLC5A8Q8N695 610 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 THAP3Q8WTV1 239 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-222ENST00000568034 ADIPOR1Q96A54 375 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 VPS33AQ96AX1 596 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 FAM120BQ96EK7 910 aaKnown RBP16.68■□□□□ 0.26
COMMD4-222ENST00000568034 GIMAP5Q96F15 307 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 VSTM2LQ96N03 204 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 AGAP4Q96P64 663 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 CCT8L2Q96SF2 557 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 ITPAQ9BY32 194 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 CDCP1Q9H5V8 836 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 SERHLQ9NQF3 203 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.68■□□□□ 0.26
COMMD4-222ENST00000568034 CCDC167Q9P0B6 97 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 BCAP29Q9UHQ4 241 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 BTNL2Q9UIR0 455 aa16.68■□□□□ 0.26
COMMD4-222ENST00000568034 TNRC6AQ8NDV7 1962 aaKnown RBP16.68■□□□□ 0.26
COMMD4-222ENST00000568034 ATMQ13315 3056 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 MKRN2OSH3BPM6 223 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 ERVH48-1M5A8F1 160 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 NADKO95544 446 aaPredicted RBP16.67■□□□□ 0.26
COMMD4-222ENST00000568034 CDKN2CP42773 168 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 MFAP5Q13361 173 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 GAB1Q13480 694 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 ACER2Q5QJU3 275 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 IRAK1BP1Q5VVH5 260 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 ISLR2Q6UXK2 745 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 TMEM64Q6YI46 380 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 GK5Q6ZS86 529 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 MSANTD1Q6ZTZ1 278 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 RPS19BP1Q86WX3 136 aaKnown RBP16.67■□□□□ 0.26
COMMD4-222ENST00000568034 GOT1L1Q8NHS2 421 aaPredicted RBP16.67■□□□□ 0.26
COMMD4-222ENST00000568034 MAGED4Q96JG8 741 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 OR52E6Q96RD3 313 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 INPP5KQ9BT40 448 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 ADNPQ9H2P0 1102 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 DDX18Q9NVP1 670 aaKnown RBP16.67■□□□□ 0.26
COMMD4-222ENST00000568034 TAS2R9Q9NYW1 312 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 MYOTQ9UBF9 498 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 TUBD1Q9UJT1 453 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 RALYQ9UKM9 306 aaKnown RBP16.67■□□□□ 0.26
COMMD4-222ENST00000568034 LHX6Q9UPM6 363 aa16.67■□□□□ 0.26
COMMD4-222ENST00000568034 HEMK1Q9Y5R4 338 aaPredicted RBP16.67■□□□□ 0.26
COMMD4-222ENST00000568034 NR5A2O00482 541 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 COQ9O75208 318 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 BCAS2O75934 225 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-222ENST00000568034 FAM107AO95990 144 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 ABCB1P08183 1280 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-222ENST00000568034 ST13P50502 369 aaKnown RBP16.66■□□□□ 0.26
COMMD4-222ENST00000568034 TLR1Q15399 786 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 MEP1AQ16819 746 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 EXOSC6Q5RKV6 272 aaKnown RBP16.66■□□□□ 0.26
COMMD4-222ENST00000568034 LINC00696Q6ZRV3 163 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 SLC29A4Q7RTT9 530 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 CNTRLQ7Z7A1 2325 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 BEST3Q8N1M1 668 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 OR5L2Q8NGL0 311 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 OR4A15Q8NGL6 344 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 HOXB13Q92826 284 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-222ENST00000568034 SPDL1Q96EA4 605 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 ZNF354BQ96LW1 612 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 ARHGAP9Q9BRR9 750 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 FOLH1BQ9HBA9 442 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 SLC6A13Q9NSD5 602 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 PRODH2Q9UF12 536 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 CFL2Q9Y281 166 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 TP53TG5Q9Y2B4 290 aa16.66■□□□□ 0.26
COMMD4-222ENST00000568034 ATRXP46100 2492 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 C2orf92A0A1B0GVN3 265 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 WWP2O00308 870 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 FCHO1O14526 889 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms