RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	DYSF	O75923	2080 aa		12.4	□□□□□ -0.42
SMG1-213	ENST00000567737	MED12	Q93074	2177 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	TCRBV7S2A1N4T	A0A589	114 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	ELOA3D	A6NLF2	546 aa	Predicted RBP	12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	LIAS	O43766	372 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	KIAA0513	O60268	411 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	CD3E	P07766	207 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	RHOXF2B	P0C7M4	288 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	ALOX15	P16050	662 aa	Predicted RBP	12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	SLC1A2	P43004	574 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	KCNC1	P48547	511 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	GZMK	P49863	264 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	WDR4	P57081	412 aa	Known RBP	12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	DHX34	Q14147	1143 aa	Known RBP	12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	SLBP	Q14493	270 aa	Known RBP eCLIP	12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	OASL	Q15646	514 aa	Known RBP	12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	SPRED3	Q2MJR0	410 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	ELOA3B	Q3SY89	546 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	ALKBH2	Q6NS38	261 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	SLC30A6	Q6NXT4	461 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	PAQR3	Q6TCH7	311 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	LUZP1	Q86V48	1076 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	KRT78	Q8N1N4	520 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	DEPDC4	Q8N2C3	294 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	C3orf56	Q8N813	242 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	ELOA3	Q8NG57	546 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	C11orf24	Q96F05	449 aa	Predicted RBP	12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	C1orf159	Q96HA4	380 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	LCOR	Q96JN0	433 aa	Predicted RBP	12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	KCNC2	Q96PR1	638 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	OSBPL11	Q9BXB4	747 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	ACTR6	Q9GZN1	396 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	PRDM7	Q9NQW5	492 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	TAS2R13	Q9NYV9	303 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	EXO1	Q9UQ84	846 aa	Known RBP	12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	MGAM2	Q2M2H8	2515 aa		12.39	□□□□□ -0.43
SMG1-213	ENST00000567737	ALDOA	P04075	364 aa	Known RBP	12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	C1GALT1C1L	P0DN25	315 aa		12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	RPS13	P62277	151 aa	Known RBP	12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	CYP1B1	Q16678	543 aa		12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	PGGHG	Q32M88	737 aa		12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	STAC2	Q6ZMT1	411 aa		12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	PRR22	Q8IZ63	422 aa		12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	ST13P4	Q8IZP2	240 aa	Predicted RBP	12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	BBOF1	Q8ND07	529 aa		12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	ANKRD7	Q92527	254 aa		12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	FIG4	Q92562	907 aa		12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	NEUROG1	Q92886	237 aa		12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	ITPKC	Q96DU7	683 aa		12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	DTNBP1	Q96EV8	351 aa		12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	ADAD1	Q96M93	576 aa	Known RBP	12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	NDN	Q99608	321 aa		12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	PELO	Q9BRX2	385 aa	Known RBP	12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	TRAF4	Q9BUZ4	470 aa	Predicted RBP	12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	KLRF1	Q9NZS2	232 aa		12.38	□□□□□ -0.43
SMG1-213	ENST00000567737	SLC35F4	A4IF30	521 aa		12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	MFAP3L	O75121	409 aa		12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	ICOSLG	O75144	302 aa		12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	HAUS5	O94927	633 aa		12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	ENO2	P09104	434 aa	Predicted RBP	12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	ZSCAN5DP	P0CG00	497 aa		12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	GNAZ	P19086	355 aa		12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	SRD5A2	P31213	254 aa		12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	DEFA6	Q01524	100 aa		12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	ZNF672	Q499Z4	452 aa	Predicted RBP	12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	LMNTD2	Q8IXW0	634 aa		12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	UBQLNL	Q8IYU4	475 aa		12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	UBL4B	Q8N7F7	174 aa		12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	SRFBP1	Q8NEF9	429 aa	Known RBP	12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	RIT1	Q92963	219 aa		12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	ZNF669	Q96BR6	464 aa	Predicted RBP	12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	GRIP2	Q9C0E4	1043 aa		12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	RPF2	Q9H7B2	306 aa	Known RBP	12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	MANSC1	Q9H8J5	431 aa		12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	RNF122	Q9H9V4	155 aa		12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	DNAJC11	Q9NVH1	559 aa		12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	FAIM	Q9NVQ4	179 aa		12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	FREM1	Q5H8C1	2179 aa		12.37	□□□□□ -0.43
SMG1-213	ENST00000567737	LOC100289279	A0A1B0GTE1	492 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	GOLGA6L19	H0YKK7	550 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	LILRA1	O75019	489 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	TBX6	O95947	436 aa	Predicted RBP	12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	USF1	P22415	310 aa	Predicted RBP	12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	SMCP	P49901	116 aa	Predicted RBP	12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	EEFSEC	P57772	596 aa	Known RBP	12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	IL2	P60568	153 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	SNTA1	Q13424	505 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	BCL2A1	Q16548	175 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	NCMAP	Q5T1S8	102 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	ARMC3	Q5W041	872 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	TMEM81	Q6P7N7	255 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	ZNF793	Q6ZN11	406 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	FAM214B	Q7L5A3	538 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	ACOT4	Q8N9L9	421 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	WDSUB1	Q8N9V3	476 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	CALML6	Q8TD86	181 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	FAM168A	Q92567	244 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	TANK	Q92844	425 aa		12.36	□□□□□ -0.43
SMG1-213	ENST00000567737	F2RL3	Q96RI0	385 aa		12.36	□□□□□ -0.43

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