RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 CTIFO43310 598 aaKnown RBP16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 BCAS2O75934 225 aaPredicted RBP16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 CLDN1O95832 211 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 DDCP20711 480 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 GPX3P22352 226 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 KCNJ2P63252 427 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 NTRK2Q16620 822 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 CMPK2Q5EBM0 449 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 ARL13AQ5H913 290 aaPredicted RBP16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 PRAMEF20Q5VT98 475 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 TMEM64Q6YI46 380 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 CLYBLQ8N0X4 340 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 FBXW8Q8N3Y1 598 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 OR10G3Q8NGC4 313 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 OR52R1Q8NGF1 315 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 BBS4Q96RK4 519 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 CENPHQ9H3R5 247 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 LRTM1Q9HBL6 345 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 MIEF1Q9NQG6 463 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 C1orf109Q9NX04 203 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 PRODH2Q9UF12 536 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 CCL27Q9Y4X3 112 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 DIDO1Q9BTC0 2240 aaKnown RBP16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 ICE1Q9Y2F5 2266 aa16.9■□□□□ 0.3
SYNGR3-204ENST00000564642 ZNHIT1O43257 154 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 TYROBPO43914 113 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 CHRNGP07510 517 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 FGF4P08620 206 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 LINC00032P0C843 101 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 NEFHP12036 1026 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 PCSK2P16519 638 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 PRPH2P23942 346 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 PTGS2P35354 604 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 MRPS35P82673 323 aaKnown RBP16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 CEP85LQ5SZL2 805 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 KANK2Q63ZY3 851 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 FAM71E1Q6IPT2 247 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 ARHGAP11AQ6P4F7 1023 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 RNF165Q6ZSG1 346 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 ZCCHC23Q6ZST2 131 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 CROCCP2Q86T23 111 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 TICAM1Q8IUC6 712 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 DDIASQ8IXT1 998 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 FAM9CQ8IZT9 166 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 ZNF675Q8TD23 568 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 CCDC120Q96HB5 630 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 MYNNQ9NPC7 610 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 TUBA8Q9NY65 449 aaPredicted RBP16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 BOKQ9UMX3 212 aaPredicted RBP16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 DTX4Q9Y2E6 619 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 TRAF6Q9Y4K3 522 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 DNAJC15Q9Y5T4 150 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 PTGDR2Q9Y5Y4 395 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 CHCHD2Q9Y6H1 151 aaPredicted RBP16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 NINQ8N4C6 2090 aa16.89■□□□□ 0.29
SYNGR3-204ENST00000564642 NPIPB8E9PQR5 432 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 GLSO94925 669 aaPredicted RBP16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 CBX7O95931 251 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 TPOP07202 933 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 BPGMP07738 259 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 SERPINB5P36952 375 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 MAGEA5P43359 124 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 FBXW4P57775 412 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 DCAF7P61962 342 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 RPP38P78345 283 aaKnown RBP16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 KIAA0040Q15053 153 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 RPS6KA2Q15349 733 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 NNATQ16517 81 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 ZNF628Q5EBL2 1059 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 TBCELQ5QJ74 424 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 SH2D4BQ5SQS7 431 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 Q6ZSR9 355 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 IKBIPQ70UQ0 350 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 NUDCD3Q8IVD9 361 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 PRR22Q8IZ63 422 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 EID3Q8N140 333 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 FAM109AQ8N4B1 249 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 TMEM251Q8N6I4 163 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 OR9A2Q8NGT5 310 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 PPP1R14CQ8TAE6 165 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 AGR3Q8TD06 166 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 DIO2Q92813 273 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 KAT2AQ92830 837 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 ERP27Q96DN0 273 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 HSPBAP1Q96EW2 488 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 LCORQ96JN0 433 aaPredicted RBP16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 JSRP1Q96MG2 331 aaPredicted RBP16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 ZIM3Q96PE6 472 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 DOHHQ9BU89 302 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 ITPAQ9BY32 194 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 NXF5Q9H1B4 397 aaKnown RBP16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 TUBB1Q9H4B7 451 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 ZDHHC11Q9H8X9 412 aa16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 CNOT11Q9UKZ1 510 aaKnown RBP16.88■□□□□ 0.29
SYNGR3-204ENST00000564642 LRATO95237 230 aa16.87■□□□□ 0.29
SYNGR3-204ENST00000564642 MYZAPP0CAP1 466 aa16.87■□□□□ 0.29
SYNGR3-204ENST00000564642 ABCD3P28288 659 aa16.87■□□□□ 0.29
SYNGR3-204ENST00000564642 NTSP30990 170 aa16.87■□□□□ 0.29
SYNGR3-204ENST00000564642 SOX18P35713 384 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms