RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 NLGN3Q9NZ94 848 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 IKZF3Q9UKT9 509 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 FZR1Q9UM11 496 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 RNF6Q9Y252 685 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 MRPS7Q9Y2R9 242 aaKnown RBP2.17□□□□□ -2.06
CHD9-209ENST00000564255 IGHV3-38A0A0C4DH36 116 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 MEIOCA2RUB1 952 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 WASH3PC4AMC7 463 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 HHLA1C9JL84 531 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 H3BTX0 84 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 NR5A2O00482 541 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 TRAFD1O14545 582 aaPredicted RBP2.17□□□□□ -2.06
CHD9-209ENST00000564255 CXCL11O14625 94 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 GPRIN2O60269 458 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 FRAT2O75474 233 aaPredicted RBP2.17□□□□□ -2.06
CHD9-209ENST00000564255 AMBPP02760 352 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 CLUP10909 449 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 RPL9P32969 192 aaKnown RBP2.17□□□□□ -2.06
CHD9-209ENST00000564255 CA8P35219 290 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 NDST2P52849 883 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 MRPS6P82932 125 aaKnown RBP2.17□□□□□ -2.06
CHD9-209ENST00000564255 EXOSC2Q13868 293 aaKnown RBP2.17□□□□□ -2.06
CHD9-209ENST00000564255 UPP1Q16831 310 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 BHLHB9Q6PI77 547 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 ZNF562Q6V9R5 426 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 WASH2PQ6VEQ5 465 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 CENPUQ71F23 418 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 ZCCHC7Q8N3Z6 543 aaKnown RBP2.17□□□□□ -2.06
CHD9-209ENST00000564255 STEAP2Q8NFT2 490 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 OR1K1Q8NGR3 316 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 USP28Q96RU2 1077 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 CLEC7AQ9BXN2 247 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 WDR13Q9H1Z4 485 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 PARLQ9H300 379 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 RPAP3Q9H6T3 665 aaPredicted RBP2.17□□□□□ -2.06
CHD9-209ENST00000564255 GORASP2Q9H8Y8 452 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 KCNK13Q9HB14 408 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 NRN1Q9NPD7 142 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 PLCXD1Q9NUJ7 323 aa2.17□□□□□ -2.06
CHD9-209ENST00000564255 LOC105371242A0A075B767 164 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 NEDD8-MDP1E9PL57 170 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 PDLIM1O00151 329 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 FBP2O00757 339 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 RIPK2O43353 540 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 GMFGO60234 142 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 JAK2O60674 1132 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 SDC3O75056 442 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 PDHBP11177 359 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 ID1P41134 155 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 PTGER3P43115 390 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 ZP4Q12836 540 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 IL24Q13007 206 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 ZNF876PQ49A33 203 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 LINC01620Q4KN68 170 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 DMKNQ6E0U4 476 aaPredicted RBP2.16□□□□□ -2.06
CHD9-209ENST00000564255 KIAA1161Q6NSJ0 714 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 NET1Q7Z628 596 aaPredicted RBP2.16□□□□□ -2.06
CHD9-209ENST00000564255 CARM1Q86X55 608 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 SPPL2AQ8TCT8 520 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 EPYCQ99645 322 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 GPR174Q9BXC1 333 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 KAT8Q9H7Z6 458 aaKnown RBP2.16□□□□□ -2.06
CHD9-209ENST00000564255 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.16□□□□□ -2.06
CHD9-209ENST00000564255 BCLAF3A2AJT9 711 aaKnown RBP2.16□□□□□ -2.06
CHD9-209ENST00000564255 LRRC30A6NM36 301 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 CTAGE5O15320 804 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 MAGEB3O15480 346 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 MAGEC1O60732 1142 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 PALMO75781 387 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 RHOBTB1O94844 696 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 NXPH2O95156 264 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 MBD3O95983 291 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 OAS1P00973 400 aaKnown RBP2.16□□□□□ -2.06
CHD9-209ENST00000564255 IGHG1P01857 330 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 GSTA1P08263 222 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 CCDC159P0C7I6 412 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 SLC35G4P0C7Q5 338 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 PRKACGP22612 351 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 PAX7P23759 505 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 PDHA2P29803 388 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 DLSTP36957 453 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 MMP12P39900 470 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 NAPAP54920 295 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 GSCP56915 257 aaPredicted RBP2.16□□□□□ -2.06
CHD9-209ENST00000564255 ZNF177Q13360 481 aaPredicted RBP2.16□□□□□ -2.06
CHD9-209ENST00000564255 KIAA0141Q14154 515 aaPredicted RBP2.16□□□□□ -2.06
CHD9-209ENST00000564255 FAM189A2Q15884 450 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 USH1GQ495M9 461 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 CCDC152Q4G0S7 254 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 LRRC23Q53EV4 343 aaPredicted RBP2.16□□□□□ -2.06
CHD9-209ENST00000564255 CFAP157Q5JU67 520 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 WLSQ5T9L3 541 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 C18orf65Q6ZTR6 163 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 MOB2Q70IA6 237 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 ZNRF1Q8ND25 227 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.16□□□□□ -2.06
CHD9-209ENST00000564255 CNRIP1Q96F85 164 aaPredicted RBP2.16□□□□□ -2.06
CHD9-209ENST00000564255 LRR1Q96L50 414 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 TSPAN18Q96SJ8 248 aa2.16□□□□□ -2.06
CHD9-209ENST00000564255 SMPD3Q9NY59 655 aaPredicted RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms