RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 C1GALT1Q9NS00 363 aa16.7■□□□□ 0.26
GDE1-203ENST00000564172 TEX10Q9NXF1 929 aaPredicted RBP16.7■□□□□ 0.26
GDE1-203ENST00000564172 SLC9B1P1A6NJY1 282 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 SULT1B1O43704 296 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 PTTG1O95997 202 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 DBTP11182 482 aaKnown RBP16.69■□□□□ 0.26
GDE1-203ENST00000564172 GLB1P16278 677 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 CD40LGP29965 261 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 PPM1FP49593 454 aaPredicted RBP16.69■□□□□ 0.26
GDE1-203ENST00000564172 PPP5CP53041 499 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 GPLD1P80108 840 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 TGM3Q08188 693 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 BNIP2Q12982 314 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 SLAMF1Q13291 335 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 GTF2IRD2BQ6EKJ0 949 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 MRM1Q6IN84 353 aaKnown RBP16.69■□□□□ 0.26
GDE1-203ENST00000564172 ZNF544Q6NX49 715 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 DBX2Q6ZNG2 339 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 GTF2IRD2Q86UP8 949 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 C19orf47Q8N9M1 422 aaKnown RBP16.69■□□□□ 0.26
GDE1-203ENST00000564172 BHLHE22Q8NFJ8 381 aaPredicted RBP16.69■□□□□ 0.26
GDE1-203ENST00000564172 UTP15Q8TED0 518 aaKnown RBP16.69■□□□□ 0.26
GDE1-203ENST00000564172 ADNPQ9H2P0 1102 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 C12orf71A8MTZ7 269 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 SMIM10L1P0DMW3 83 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 KRT20P35900 424 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 HLCSP50747 726 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 SNRPNP63162 240 aaKnown RBP16.69■□□□□ 0.26
GDE1-203ENST00000564172 NKAIN2Q5VXU1 208 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 ZNF621Q6ZSS3 439 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 FAM92BQ6ZTR7 304 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 CADM2Q8N3J6 435 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 SAP25Q8TEE9 199 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 CIDECQ96AQ7 238 aaPredicted RBP16.69■□□□□ 0.26
GDE1-203ENST00000564172 SMIM10Q96HG1 83 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 KCTD14Q9BQ13 255 aaPredicted RBP16.69■□□□□ 0.26
GDE1-203ENST00000564172 RAB33BQ9H082 229 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 PIF1Q9H611 641 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 RPRD1BQ9NQG5 326 aaKnown RBP16.69■□□□□ 0.26
GDE1-203ENST00000564172 EPHA6Q9UF33 1036 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 EGFL7Q9UHF1 273 aa16.69■□□□□ 0.26
GDE1-203ENST00000564172 NUP214P35658 2090 aaPredicted RBP16.69■□□□□ 0.26
GDE1-203ENST00000564172 URADA6NGE7 173 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 PATE3B3GLJ2 98 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 HCRTR1O43613 425 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 TBX19O60806 448 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 OR7A10O76100 309 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 SCELO95171 688 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 ZNF888P0CJ79 500 aaPredicted RBP16.68■□□□□ 0.26
GDE1-203ENST00000564172 MYF5P13349 255 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 CERS1P27544 350 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 ALDH9A1P49189 494 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 OR1D5P58170 312 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 BTN3A2P78410 334 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 LRRC74AQ0VAA2 488 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 ZFP69Q49AA0 526 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 ZNF583Q96ND8 569 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 CAPN10Q9HC96 672 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 NLGN3Q9NZ94 848 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 USP22Q9UPT9 525 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 HCN4Q9Y3Q4 1203 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 ASB4Q9Y574 426 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 MYO15AQ9UKN7 3530 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 KCNK2O95069 426 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 GFERP55789 205 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 ANGPT1Q15389 498 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 LYPD8Q6UX82 237 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 DHFR2Q86XF0 187 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 PTRH1Q86Y79 214 aaKnown RBP16.68■□□□□ 0.26
GDE1-203ENST00000564172 ANKFN1Q8N957 763 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 OR10A6Q8NH74 314 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 CEP76Q8TAP6 659 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 OPALINQ96PE5 141 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 TGM7Q96PF1 710 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 CITED4Q96RK1 184 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 CPPED1Q9BRF8 314 aaPredicted RBP16.68■□□□□ 0.26
GDE1-203ENST00000564172 DUSP23Q9BVJ7 150 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 GAREM1Q9H706 876 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 KAT8Q9H7Z6 458 aaKnown RBP16.68■□□□□ 0.26
GDE1-203ENST00000564172 TOR4AQ9NXH8 423 aa16.68■□□□□ 0.26
GDE1-203ENST00000564172 IGHV1OR21-1A0A087WYE8 117 aa16.67■□□□□ 0.26
GDE1-203ENST00000564172 SAGE2PA6NJ88 616 aa16.67■□□□□ 0.26
GDE1-203ENST00000564172 DRD2P14416 443 aa16.67■□□□□ 0.26
GDE1-203ENST00000564172 HTR1EP28566 365 aa16.67■□□□□ 0.26
GDE1-203ENST00000564172 DDOSTP39656 456 aa16.67■□□□□ 0.26
GDE1-203ENST00000564172 GPR3P46089 330 aa16.67■□□□□ 0.26
GDE1-203ENST00000564172 HBA1P69905 142 aa16.67■□□□□ 0.26
GDE1-203ENST00000564172 ZNF181Q2M3W8 571 aa16.67■□□□□ 0.26
GDE1-203ENST00000564172 MANEAQ5SRI9 462 aa16.67■□□□□ 0.26
GDE1-203ENST00000564172 ATAD3CQ5T2N8 411 aa16.67■□□□□ 0.26
GDE1-203ENST00000564172 FAM180BQ6P0A1 224 aa16.67■□□□□ 0.26
GDE1-203ENST00000564172 CYP2R1Q6VVX0 501 aa16.67■□□□□ 0.26
GDE1-203ENST00000564172 ZCCHC10Q8TBK6 192 aa16.67■□□□□ 0.26
GDE1-203ENST00000564172 UCN3Q969E3 161 aa16.67■□□□□ 0.26
GDE1-203ENST00000564172 ACTR3BQ9P1U1 418 aa16.67■□□□□ 0.26
GDE1-203ENST00000564172 C5AR2Q9P296 337 aa16.67■□□□□ 0.26
GDE1-203ENST00000564172 ATG4BQ9Y4P1 393 aa16.67■□□□□ 0.26
GDE1-203ENST00000564172 PCDHGA10Q9Y5H3 936 aa16.67■□□□□ 0.26
GDE1-203ENST00000564172 B4GAT1O43505 415 aa16.66■□□□□ 0.26
GDE1-203ENST00000564172 DNAJB5O75953 348 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms