RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 DNAJC13O75165 2243 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 HECTD1Q9ULT8 2610 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 CCL21O00585 134 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 PRRG2O14669 202 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 TM9SF1O15321 606 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 CHRNGP07510 517 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 RNF224P0DH78 156 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 CREB1P16220 341 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 GPX3P22352 226 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 ETV4P43268 484 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 PPIAP62937 165 aaKnown RBP18.3■□□□□ 0.52
CMTM3-207ENST00000564060 KCNJ2P63252 427 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 MGAT2Q10469 447 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 ZNF628Q5EBL2 1059 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 SH2D4BQ5SQS7 431 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 FAM71E1Q6IPT2 247 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 ARHGAP11AQ6P4F7 1023 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 LRIG3Q6UXM1 1119 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 NUDCD3Q8IVD9 361 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 FAM9CQ8IZT9 166 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 PPP1R14CQ8TAE6 165 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 TWIST2Q8WVJ9 160 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 HSPBAP1Q96EW2 488 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 ZIM3Q96PE6 472 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 SECISBP2Q96T21 854 aaKnown RBP18.3■□□□□ 0.52
CMTM3-207ENST00000564060 STMN4Q9H169 189 aaPredicted RBP18.3■□□□□ 0.52
CMTM3-207ENST00000564060 TAS2R7Q9NYW3 318 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 DNAJC15Q9Y5T4 150 aa18.3■□□□□ 0.52
CMTM3-207ENST00000564060 DOPEY1Q5JWR5 2465 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 ZNF407Q9C0G0 2248 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 ACOX3O15254 700 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 CDC40O60508 579 aaKnown RBP eCLIP18.29■□□□□ 0.52
CMTM3-207ENST00000564060 CBX7O95931 251 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 ESRRAP11474 423 aaPredicted RBP18.29■□□□□ 0.52
CMTM3-207ENST00000564060 NAGAP17050 411 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 NTSP30990 170 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 DNASE1L1P49184 302 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 PSPHP78330 225 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 DUSP2Q05923 314 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 EXOSC7Q15024 291 aaKnown RBP18.29■□□□□ 0.52
CMTM3-207ENST00000564060 KIAA0040Q15053 153 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 LTB4RQ15722 352 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 HYAL4Q2M3T9 481 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 CMPK2Q5EBM0 449 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 FAM180BQ6P0A1 224 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 ZCCHC23Q6ZST2 131 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 MAMDC2Q7Z304 686 aaPredicted RBP18.29■□□□□ 0.52
CMTM3-207ENST00000564060 TICAM1Q8IUC6 712 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 DDIASQ8IXT1 998 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 FAM109AQ8N4B1 249 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 OR10G3Q8NGC4 313 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 OR52R1Q8NGF1 315 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.29■□□□□ 0.52
CMTM3-207ENST00000564060 LCORQ96JN0 433 aaPredicted RBP18.29■□□□□ 0.52
CMTM3-207ENST00000564060 CCT7Q99832 543 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 ZDHHC11Q9H8X9 412 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 PLSCR2Q9NRY7 297 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 SH3BGRL2Q9UJC5 107 aa18.29■□□□□ 0.52
CMTM3-207ENST00000564060 CHCHD2Q9Y6H1 151 aaPredicted RBP18.29■□□□□ 0.52
CMTM3-207ENST00000564060 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.29■□□□□ 0.52
CMTM3-207ENST00000564060 PINLYPA6NC86 204 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 ANKRD33BA6NCL7 494 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 G3V3Y1 287 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 WISP2O76076 250 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 GLSO94925 669 aaPredicted RBP18.28■□□□□ 0.52
CMTM3-207ENST00000564060 ZWINTO95229 277 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 PCSK2P16519 638 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 DDX5P17844 614 aaKnown RBP18.28■□□□□ 0.52
CMTM3-207ENST00000564060 ABCD3P28288 659 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 MAPK1P28482 360 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 PTGER1P34995 402 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 PTGS2P35354 604 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 SERPINB4P48594 390 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 MRPS35P82673 323 aaKnown RBP18.28■□□□□ 0.52
CMTM3-207ENST00000564060 C3AR1Q16581 482 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 RPTNQ6XPR3 784 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 Q6ZSR9 355 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 EXOC3L1Q86VI1 746 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 OR9A2Q8NGT5 310 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 DIO2Q92813 273 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 PGM2Q96G03 612 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 ZNF764Q96H86 408 aaPredicted RBP18.28■□□□□ 0.52
CMTM3-207ENST00000564060 FCRL1Q96LA6 429 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 PPP3R2Q96LZ3 170 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 ITPAQ9BY32 194 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 TUBA8Q9NY65 449 aaPredicted RBP18.28■□□□□ 0.52
CMTM3-207ENST00000564060 B4GALT7Q9UBV7 327 aa18.28■□□□□ 0.52
CMTM3-207ENST00000564060 SETXQ7Z333 2677 aaKnown RBP18.27■□□□□ 0.52
CMTM3-207ENST00000564060 NCOA6Q14686 2063 aaPredicted RBP18.27■□□□□ 0.52
CMTM3-207ENST00000564060 A0A0G2JMM0 328 aa18.27■□□□□ 0.52
CMTM3-207ENST00000564060 A0A1W2PPB8 328 aa18.27■□□□□ 0.52
CMTM3-207ENST00000564060 A0A1W2PRS3 328 aa18.27■□□□□ 0.52
CMTM3-207ENST00000564060 A1L4Q6 167 aa18.27■□□□□ 0.52
CMTM3-207ENST00000564060 FAM166BA8MTA8 275 aa18.27■□□□□ 0.52
CMTM3-207ENST00000564060 KIR3DP1A8MWS1 328 aa18.27■□□□□ 0.52
CMTM3-207ENST00000564060 MYO1GB0I1T2 1018 aa18.27■□□□□ 0.52
CMTM3-207ENST00000564060 LSM1O15116 133 aaKnown RBP18.27■□□□□ 0.52
CMTM3-207ENST00000564060 BIRC5O15392 142 aa18.27■□□□□ 0.52
CMTM3-207ENST00000564060 PLOD3O60568 738 aa18.27■□□□□ 0.52
CMTM3-207ENST00000564060 ZG16O60844 167 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms