RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 RYDENQ9NUL5 291 aaKnown RBP28.31■■■□□ 2.12
CMTM4-204ENST00000563952 CFL2Q9Y281 166 aa28.31■■■□□ 2.12
CMTM4-204ENST00000563952 CCL27Q9Y4X3 112 aa28.31■■■□□ 2.12
CMTM4-204ENST00000563952 NPFFR2Q9Y5X5 522 aa28.31■■■□□ 2.12
CMTM4-204ENST00000563952 CHCHD2Q9Y6H1 151 aaPredicted RBP28.31■■■□□ 2.12
CMTM4-204ENST00000563952 CAPN14A8MX76 684 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 RGS14O43566 566 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 GLSO94925 669 aaPredicted RBP28.3■■■□□ 2.12
CMTM4-204ENST00000563952 CBX7O95931 251 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 CHEK2O96017 543 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 DDCP20711 480 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 SOX18P35713 384 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 FBXW4P57775 412 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 KCNJ2P63252 427 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 NTRK2Q16620 822 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 ARL13AQ5H913 290 aaPredicted RBP28.3■■■□□ 2.12
CMTM4-204ENST00000563952 KANK2Q63ZY3 851 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 MTFR2Q6P444 385 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 OR9A2Q8NGT5 310 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 FAM76AQ8TAV0 307 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 KAT2AQ92830 837 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 ITPAQ9BY32 194 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 NXF5Q9H1B4 397 aaKnown RBP28.3■■■□□ 2.12
CMTM4-204ENST00000563952 MIEF1Q9NQG6 463 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 EHD3Q9NZN3 535 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 CNIH4Q9P003 139 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 SENP1Q9P0U3 644 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 SEC23IPQ9Y6Y8 1000 aaKnown RBP28.3■■■□□ 2.12
CMTM4-204ENST00000563952 GTF3C1Q12789 2109 aa28.3■■■□□ 2.12
CMTM4-204ENST00000563952 PRRG2O14669 202 aa28.29■■■□□ 2.12
CMTM4-204ENST00000563952 LINC00032P0C843 101 aa28.29■■■□□ 2.12
CMTM4-204ENST00000563952 COL8A1P27658 744 aa28.29■■■□□ 2.12
CMTM4-204ENST00000563952 PTGS2P35354 604 aa28.29■■■□□ 2.12
CMTM4-204ENST00000563952 FOXO1Q12778 655 aa28.29■■■□□ 2.12
CMTM4-204ENST00000563952 ZNF628Q5EBL2 1059 aa28.29■■■□□ 2.12
CMTM4-204ENST00000563952 TICAM1Q8IUC6 712 aa28.29■■■□□ 2.12
CMTM4-204ENST00000563952 TMEM251Q8N6I4 163 aa28.29■■■□□ 2.12
CMTM4-204ENST00000563952 C17orf47Q8NEP4 570 aa28.29■■■□□ 2.12
CMTM4-204ENST00000563952 ZNF675Q8TD23 568 aa28.29■■■□□ 2.12
CMTM4-204ENST00000563952 BBS4Q96RK4 519 aa28.29■■■□□ 2.12
CMTM4-204ENST00000563952 CENPHQ9H3R5 247 aa28.29■■■□□ 2.12
CMTM4-204ENST00000563952 ANKRA2Q9H9E1 313 aa28.29■■■□□ 2.12
CMTM4-204ENST00000563952 LRTM1Q9HBL6 345 aa28.29■■■□□ 2.12
CMTM4-204ENST00000563952 EML4Q9HC35 981 aaKnown RBP28.29■■■□□ 2.12
CMTM4-204ENST00000563952 MYNNQ9NPC7 610 aa28.29■■■□□ 2.12
CMTM4-204ENST00000563952 C1orf109Q9NX04 203 aa28.29■■■□□ 2.12
CMTM4-204ENST00000563952 TMEM233B4DJY2 109 aa28.28■■■□□ 2.12
CMTM4-204ENST00000563952 TP53I11O14683 189 aa28.28■■■□□ 2.12
CMTM4-204ENST00000563952 TYROBPO43914 113 aa28.28■■■□□ 2.12
CMTM4-204ENST00000563952 MAGEA5P43359 124 aa28.28■■■□□ 2.12
CMTM4-204ENST00000563952 TMED10P49755 219 aaKnown RBP28.28■■■□□ 2.12
CMTM4-204ENST00000563952 RPS6KA2Q15349 733 aa28.28■■■□□ 2.12
CMTM4-204ENST00000563952 FAM71E1Q6IPT2 247 aa28.28■■■□□ 2.12
CMTM4-204ENST00000563952 PAOXQ6QHF9 649 aa28.28■■■□□ 2.12
CMTM4-204ENST00000563952 OR2T11Q8NH01 316 aa28.28■■■□□ 2.12
CMTM4-204ENST00000563952 AGR3Q8TD06 166 aa28.28■■■□□ 2.12
CMTM4-204ENST00000563952 DIO2Q92813 273 aa28.28■■■□□ 2.12
CMTM4-204ENST00000563952 TUBB1Q9H4B7 451 aa28.28■■■□□ 2.12
CMTM4-204ENST00000563952 ZDHHC11Q9H8X9 412 aa28.28■■■□□ 2.12
CMTM4-204ENST00000563952 PRODH2Q9UF12 536 aa28.28■■■□□ 2.12
CMTM4-204ENST00000563952 CNOT11Q9UKZ1 510 aaKnown RBP28.28■■■□□ 2.12
CMTM4-204ENST00000563952 DNAJC15Q9Y5T4 150 aa28.28■■■□□ 2.12
CMTM4-204ENST00000563952 TPOP07202 933 aa28.27■■■□□ 2.12
CMTM4-204ENST00000563952 TUBBP07437 444 aa28.27■■■□□ 2.12
CMTM4-204ENST00000563952 PRPH2P23942 346 aa28.27■■■□□ 2.12
CMTM4-204ENST00000563952 PRSS53Q2L4Q9 553 aa28.27■■■□□ 2.12
CMTM4-204ENST00000563952 CEP85LQ5SZL2 805 aa28.27■■■□□ 2.12
CMTM4-204ENST00000563952 ARHGAP11AQ6P4F7 1023 aa28.27■■■□□ 2.12
CMTM4-204ENST00000563952 C3P1Q6ZMU1 363 aa28.27■■■□□ 2.12
CMTM4-204ENST00000563952 DOLPP1Q86YN1 238 aa28.27■■■□□ 2.12
CMTM4-204ENST00000563952 DDIASQ8IXT1 998 aa28.27■■■□□ 2.12
CMTM4-204ENST00000563952 FAM9CQ8IZT9 166 aa28.27■■■□□ 2.12
CMTM4-204ENST00000563952 FAM109AQ8N4B1 249 aa28.27■■■□□ 2.12
CMTM4-204ENST00000563952 JSRP1Q96MG2 331 aaPredicted RBP28.27■■■□□ 2.12
CMTM4-204ENST00000563952 PLSCR2Q9NRY7 297 aa28.27■■■□□ 2.12
CMTM4-204ENST00000563952 BOKQ9UMX3 212 aaPredicted RBP28.27■■■□□ 2.12
CMTM4-204ENST00000563952 MEMO1Q9Y316 297 aa28.27■■■□□ 2.12
CMTM4-204ENST00000563952 TRAF6Q9Y4K3 522 aa28.27■■■□□ 2.12
CMTM4-204ENST00000563952 ATP6AP2A0A1C7CYW4 349 aa28.26■■■□□ 2.11
CMTM4-204ENST00000563952 ATP6AP2O75787 350 aa28.26■■■□□ 2.11
CMTM4-204ENST00000563952 BPGMP07738 259 aa28.26■■■□□ 2.11
CMTM4-204ENST00000563952 NEFHP12036 1026 aa28.26■■■□□ 2.11
CMTM4-204ENST00000563952 ABCD3P28288 659 aa28.26■■■□□ 2.11
CMTM4-204ENST00000563952 MPIP34949 423 aa28.26■■■□□ 2.11
CMTM4-204ENST00000563952 KIAA0040Q15053 153 aa28.26■■■□□ 2.11
CMTM4-204ENST00000563952 SH2D4BQ5SQS7 431 aa28.26■■■□□ 2.11
CMTM4-204ENST00000563952 Q6ZSR9 355 aa28.26■■■□□ 2.11
CMTM4-204ENST00000563952 CD163Q86VB7 1156 aa28.26■■■□□ 2.11
CMTM4-204ENST00000563952 PUM2Q8TB72 1066 aaKnown RBP eCLIP28.26■■■□□ 2.11
CMTM4-204ENST00000563952 FAM57AQ8TBR7 257 aa28.26■■■□□ 2.11
CMTM4-204ENST00000563952 TWIST2Q8WVJ9 160 aa28.26■■■□□ 2.11
CMTM4-204ENST00000563952 ITLN2Q8WWU7 325 aaPredicted RBP28.26■■■□□ 2.11
CMTM4-204ENST00000563952 METTL2AQ96IZ6 378 aaKnown RBP28.26■■■□□ 2.11
CMTM4-204ENST00000563952 LCORQ96JN0 433 aaPredicted RBP28.26■■■□□ 2.11
CMTM4-204ENST00000563952 PHF12Q96QT6 1004 aa28.26■■■□□ 2.11
CMTM4-204ENST00000563952 DOHHQ9BU89 302 aa28.26■■■□□ 2.11
CMTM4-204ENST00000563952 PROK2Q9HC23 129 aa28.26■■■□□ 2.11
CMTM4-204ENST00000563952 LIPGQ9Y5X9 500 aa28.26■■■□□ 2.11
CMTM4-204ENST00000563952 EXPH5Q8NEV8 1989 aa28.25■■■□□ 2.11
CMTM4-204ENST00000563952 CTIFO43310 598 aaKnown RBP28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms