RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 SAMD4AQ9UPU9 718 aaKnown RBP20.52■□□□□ 0.88
LINC01960-201ENST00000563759 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.52■□□□□ 0.87
LINC01960-201ENST00000563759 B4E171 279 aa20.52■□□□□ 0.87
LINC01960-201ENST00000563759 ZNF682O95780 498 aa20.52■□□□□ 0.87
LINC01960-201ENST00000563759 IFI6P09912 130 aa20.52■□□□□ 0.87
LINC01960-201ENST00000563759 TSPAN7P41732 249 aa20.52■□□□□ 0.87
LINC01960-201ENST00000563759 CLDN6P56747 220 aa20.52■□□□□ 0.87
LINC01960-201ENST00000563759 TXNL4AP83876 142 aaKnown RBP20.52■□□□□ 0.87
LINC01960-201ENST00000563759 BIKQ13323 160 aa20.52■□□□□ 0.87
LINC01960-201ENST00000563759 ISXQ2M1V0 245 aa20.52■□□□□ 0.87
LINC01960-201ENST00000563759 ENPP6Q6UWR7 440 aa20.52■□□□□ 0.87
LINC01960-201ENST00000563759 LGI4Q8N135 537 aa20.52■□□□□ 0.87
LINC01960-201ENST00000563759 EID3Q8N140 333 aa20.52■□□□□ 0.87
LINC01960-201ENST00000563759 SIMC1Q8NDZ2 872 aa20.52■□□□□ 0.87
LINC01960-201ENST00000563759 GIMAP5Q96F15 307 aa20.52■□□□□ 0.87
LINC01960-201ENST00000563759 UGT2B28Q9BY64 529 aa20.52■□□□□ 0.87
LINC01960-201ENST00000563759 SLC22A11Q9NSA0 550 aa20.52■□□□□ 0.87
LINC01960-201ENST00000563759 NINQ8N4C6 2090 aa20.52■□□□□ 0.87
LINC01960-201ENST00000563759 ITIH1P19827 911 aa20.51■□□□□ 0.87
LINC01960-201ENST00000563759 SOX18P35713 384 aa20.51■□□□□ 0.87
LINC01960-201ENST00000563759 EEF1A2Q05639 463 aaKnown RBP20.51■□□□□ 0.87
LINC01960-201ENST00000563759 EXOSC7Q15024 291 aaKnown RBP20.51■□□□□ 0.87
LINC01960-201ENST00000563759 FAM98BQ52LJ0 330 aaKnown RBP20.51■□□□□ 0.87
LINC01960-201ENST00000563759 REEP3Q6NUK4 255 aa20.51■□□□□ 0.87
LINC01960-201ENST00000563759 DHRS13Q6UX07 377 aa20.51■□□□□ 0.87
LINC01960-201ENST00000563759 PQLC1Q8N2U9 271 aa20.51■□□□□ 0.87
LINC01960-201ENST00000563759 SLC38A5Q8WUX1 472 aa20.51■□□□□ 0.87
LINC01960-201ENST00000563759 TSLPQ969D9 159 aa20.51■□□□□ 0.87
LINC01960-201ENST00000563759 POP5Q969H6 163 aaKnown RBP20.51■□□□□ 0.87
LINC01960-201ENST00000563759 CTHRC1Q96CG8 243 aa20.51■□□□□ 0.87
LINC01960-201ENST00000563759 TMEM19Q96HH6 336 aa20.51■□□□□ 0.87
LINC01960-201ENST00000563759 ULBP3Q9BZM4 244 aa20.51■□□□□ 0.87
LINC01960-201ENST00000563759 ARMC1Q9NVT9 282 aa20.51■□□□□ 0.87
LINC01960-201ENST00000563759 RPS6KA6Q9UK32 745 aa20.51■□□□□ 0.87
LINC01960-201ENST00000563759 MKL2Q9ULH7 1088 aa20.51■□□□□ 0.87
LINC01960-201ENST00000563759 ZFHX2Q9C0A1 2572 aaPredicted RBP20.51■□□□□ 0.87
LINC01960-201ENST00000563759 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.5■□□□□ 0.87
LINC01960-201ENST00000563759 TPST1O60507 370 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 CSO75390 466 aaKnown RBP20.5■□□□□ 0.87
LINC01960-201ENST00000563759 NME6O75414 186 aaPredicted RBP20.5■□□□□ 0.87
LINC01960-201ENST00000563759 RORAP35398 523 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 MGAT2Q10469 447 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 MAP4K2Q12851 820 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 CDCP2Q5VXM1 449 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 RAB11FIP2Q7L804 512 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 FAM86B1Q8N7N1 296 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 DEFB124Q8NES8 71 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 FAM110BQ8TC76 370 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 STT3BQ8TCJ2 826 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 ADAMTS15Q8TE58 950 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 RNF145Q96MT1 663 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 OR7D2Q96RA2 312 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 TGIF2Q9GZN2 237 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 OLAHQ9NV23 265 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 C14orf105Q9NVL8 296 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 C6orf203Q9P0P8 240 aaPredicted RBP20.5■□□□□ 0.87
LINC01960-201ENST00000563759 IFT80Q9P2H3 777 aaPredicted RBP20.5■□□□□ 0.87
LINC01960-201ENST00000563759 ASNA1O43681 348 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 SLC28A2O43868 658 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 COQ9O75208 318 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 PRKD3O94806 890 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 TFPTP0C1Z6 253 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 NR2F1P10589 423 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 TNNI3P19429 210 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 AGXTP21549 392 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 PGDP52209 483 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 RAB15P59190 212 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 RHAGQ02094 409 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 CHRNB3Q05901 458 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 IRAK1BP1Q5VVH5 260 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 ZNF385CQ66K41 422 aaPredicted RBP20.5■□□□□ 0.87
LINC01960-201ENST00000563759 RNF111Q6ZNA4 994 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 WDR53Q7Z5U6 358 aaPredicted RBP20.5■□□□□ 0.87
LINC01960-201ENST00000563759 SLC9A6Q92581 669 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 PMEPA1Q969W9 287 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 SLC47A1Q96FL8 570 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 DEPDC7Q96QD5 511 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 CNPPD1Q9BV87 410 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 ASPSCR1Q9BZE9 553 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 VN1R1Q9GZP7 353 aa20.5■□□□□ 0.87
LINC01960-201ENST00000563759 KNTC1P50748 2209 aa20.49■□□□□ 0.87
LINC01960-201ENST00000563759 IGLV3-12A0A075B6K2 115 aa20.49■□□□□ 0.87
LINC01960-201ENST00000563759 IGKV3D-11A0A0A0MRZ8 115 aa20.49■□□□□ 0.87
LINC01960-201ENST00000563759 DUXAA6NLW8 204 aa20.49■□□□□ 0.87
LINC01960-201ENST00000563759 MEN1O00255 615 aa20.49■□□□□ 0.87
LINC01960-201ENST00000563759 TIPRLO75663 272 aa20.49■□□□□ 0.87
LINC01960-201ENST00000563759 MT-CO3P00414 261 aa20.49■□□□□ 0.87
LINC01960-201ENST00000563759 ZNF28P17035 718 aa20.49■□□□□ 0.87
LINC01960-201ENST00000563759 ZNF267Q14586 743 aaPredicted RBP20.49■□□□□ 0.87
LINC01960-201ENST00000563759 NSDHLQ15738 373 aa20.49■□□□□ 0.87
LINC01960-201ENST00000563759 DCAF12Q5T6F0 453 aa20.49■□□□□ 0.87
LINC01960-201ENST00000563759 ATAD3BQ5T9A4 648 aa20.49■□□□□ 0.87
LINC01960-201ENST00000563759 CDC73Q6P1J9 531 aa20.49■□□□□ 0.87
LINC01960-201ENST00000563759 SHISA6Q6ZSJ9 500 aa20.49■□□□□ 0.87
LINC01960-201ENST00000563759 GLRX5Q86SX6 157 aa20.49■□□□□ 0.87
LINC01960-201ENST00000563759 C7orf57Q8NEG2 295 aa20.49■□□□□ 0.87
LINC01960-201ENST00000563759 OR52R1Q8NGF1 315 aa20.49■□□□□ 0.87
LINC01960-201ENST00000563759 LIN37Q96GY3 246 aaPredicted RBP20.49■□□□□ 0.87
LINC01960-201ENST00000563759 PNO1Q9NRX1 252 aaKnown RBP20.49■□□□□ 0.87
LINC01960-201ENST00000563759 ADPRHL2Q9NX46 363 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms