RNA–Protein interactions for RNA: ENST00000563554.1

AC009163.3-201, humanhuman

TSL 3 BASIC

Gene AC009163.3, Length 852 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.3-201ENST00000563554 ITGA10O75578 1167 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 SLC22A3O75751 556 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 CBX7O95931 251 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 F10P00742 488 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 KIR3DL1P43629 444 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 ST13P50502 369 aaKnown RBP13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 CDK9P50750 372 aaKnown RBP13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 ARFIP2P53365 341 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 GNGT1P63211 74 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 PHC1P78364 1004 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 ARG2P78540 354 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 SRSF11Q05519 484 aaKnown RBP13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 FAM174BQ3ZCQ3 159 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 SPANXN4Q5MJ08 99 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 HLA-DQA1Q5Y7H0 255 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 HPS6Q86YV9 775 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 ZADH2Q8N4Q0 377 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 ZNF615Q8N8J6 731 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 OR7G2Q8NG99 324 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 NUBPLQ8TB37 319 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 C10orf82Q8WW14 230 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 CTHRC1Q96CG8 243 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 COQ8BQ96D53 544 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 ERP27Q96DN0 273 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 MAGED4Q96JG8 741 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 WWTR1Q9GZV5 400 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 NSRP1Q9H0G5 558 aaKnown RBP13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 ZIM2Q9NZV7 527 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 ZNF639Q9UID6 485 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 TRIM33Q9UPN9 1127 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 SVILO95425 2214 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 CHD6Q8TD26 2715 aa13.06□□□□□ -0.32
AC009163.3-201ENST00000563554 C2orf92A0A1B0GVN3 265 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 WWP2O00308 870 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 CFLARO15519 480 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 PLOD3O60568 738 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 BCAS2O75934 225 aaPredicted RBP13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 C6orf47O95873 294 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 ABCB1P08183 1280 aaPredicted RBP13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 NCF2P19878 526 aaPredicted RBP13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 S1PR1P21453 382 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 GPX3P22352 226 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 LSP1P33241 339 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 SOAT1P35610 550 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 CASRP41180 1078 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 MLF1P58340 268 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 ZNF155Q12901 538 aaPredicted RBP13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 DUSP8Q13202 625 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 SQLEQ14534 574 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 IGFL2Q6UWQ7 119 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 C16orf47Q6ZP98 133 aaPredicted RBP13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 GLB1L3Q8NCI6 653 aaPredicted RBP13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 SIMC1Q8NDZ2 872 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 OR8J2Q8NGG1 315 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 OR9I1Q8NGQ6 314 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 C16orf52Q8NHV5 167 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 HS3ST6Q96QI5 342 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 LMF1Q96S06 567 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 UTP23Q9BRU9 249 aaKnown RBP13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 ITPAQ9BY32 194 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 FAM107BQ9H098 131 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 NEUROD4Q9HD90 331 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 SLC52A3Q9NQ40 469 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 SDR39U1Q9NRG7 319 aaPredicted RBP13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 ANKRD10Q9NXR5 420 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 STMN3Q9NZ72 180 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 KLHL14Q9P2G3 628 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 MYOTQ9UBF9 498 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 PRODH2Q9UF12 536 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 DTX4Q9Y2E6 619 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 SPTA1P02549 2419 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 SHANK1Q9Y566 2161 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 PCNX3Q9H6A9 2034 aa13.05□□□□□ -0.32
AC009163.3-201ENST00000563554 A0A087WV62 115 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 OR5H15A6NDH6 313 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 TMEM200CA6NKL6 621 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 PLOD2O00469 737 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 RNASET2O00584 256 aaKnown RBP13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 SHOX2O60902 331 aaPredicted RBP13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 SCN2BO60939 215 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 OR2J2O76002 312 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 WDPCPO95876 746 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 C1QCP02747 245 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 S100A3P33764 101 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 CD97P48960 835 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 SSR4P51571 173 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 WNT3P56703 355 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 OC90Q02509 493 aaPredicted RBP13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 MLC1Q15049 377 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 NNATQ16517 81 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 FHL5Q5TD97 284 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 PAOXQ6QHF9 649 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 IGFL3Q6UXB1 125 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 ANKRD46Q86W74 232 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 CLECL1Q8IZS7 167 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 ARMC10Q8N2F6 343 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 TMEM156Q8N614 296 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 LSM14AQ8ND56 463 aaKnown RBP13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 VPS37AQ8NEZ2 397 aa13.04□□□□□ -0.32
AC009163.3-201ENST00000563554 OR4A15Q8NGL6 344 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms