RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 GPAT3Q53EU6 434 aa17.96■□□□□ 0.47
SMPD3-203ENST00000563226 FGD3Q5JSP0 725 aa17.96■□□□□ 0.47
SMPD3-203ENST00000563226 LRRC25Q8N386 305 aaPredicted RBP17.96■□□□□ 0.47
SMPD3-203ENST00000563226 OR5T3Q8NGG3 340 aa17.96■□□□□ 0.47
SMPD3-203ENST00000563226 FAM81AQ8TBF8 368 aa17.96■□□□□ 0.47
SMPD3-203ENST00000563226 DOK4Q8TEW6 326 aa17.96■□□□□ 0.47
SMPD3-203ENST00000563226 DGCR6LQ9BY27 220 aa17.96■□□□□ 0.47
SMPD3-203ENST00000563226 DUSP21Q9H596 190 aa17.96■□□□□ 0.47
SMPD3-203ENST00000563226 SNX5Q9Y5X3 404 aa17.96■□□□□ 0.47
SMPD3-203ENST00000563226 URADA6NGE7 173 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 INMTO95050 263 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 ELAVL4P26378 380 aaKnown RBP17.95■□□□□ 0.46
SMPD3-203ENST00000563226 MAOBP27338 520 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 SOX18P35713 384 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 CXCR4P61073 352 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 NPTX1Q15818 432 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 DEFB110Q30KQ9 67 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 PROX2Q3B8N5 592 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 ABHD13Q7L211 337 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 KRT73Q86Y46 540 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 TMEM52Q8NDY8 209 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 RASSF5Q8WWW0 418 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 MUL1Q969V5 352 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 DCUN1D5Q9BTE7 237 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 C3orf14Q9HBI5 128 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 FAM60AQ9NP50 221 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 SLC6A14Q9UN76 642 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 SLC22A7Q9Y694 548 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 TMEM265A0A087WTH1 108 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 M0R129 80 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 MAN1A2O60476 641 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 FAM20BO75063 409 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 ZNF217O75362 1048 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 ST6GAL1P15907 406 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 MAP2K4P45985 399 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 EMX1Q04741 257 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-203ENST00000563226 KLHL17Q6TDP4 642 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 OOSP2Q86WS3 158 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 OR4K14Q8NGD5 310 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 ZNF420Q8TAQ5 688 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-203ENST00000563226 DHRS1Q96LJ7 313 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 A4GNTQ9UNA3 340 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 TPRKBQ9Y3C4 175 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 PCDHGA10Q9Y5H3 936 aa17.95■□□□□ 0.46
SMPD3-203ENST00000563226 ZIC2O95409 532 aaPredicted RBP17.94■□□□□ 0.46
SMPD3-203ENST00000563226 MAGEA8P43361 318 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 MASP1P48740 699 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 BLKP51451 505 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 GP2P55259 537 aaKnown RBP17.94■□□□□ 0.46
SMPD3-203ENST00000563226 VSX2P58304 361 aaPredicted RBP17.94■□□□□ 0.46
SMPD3-203ENST00000563226 RELAQ04206 551 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 PIN1Q13526 163 aaPredicted RBP17.94■□□□□ 0.46
SMPD3-203ENST00000563226 CCDC103Q8IW40 242 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 CSNK1A1LQ8N752 337 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 ZNF540Q8NDQ6 660 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 FAR1Q8WVX9 515 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 ZG16BQ96DA0 208 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 CNDP2Q96KP4 475 aaKnown RBP17.94■□□□□ 0.46
SMPD3-203ENST00000563226 SLC38A1Q9H2H9 487 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 ZNF556Q9HAH1 456 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 ACAD8Q9UKU7 415 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 ARRDC5A6NEK1 342 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 MT-ND2P03891 347 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 ITIH1P19827 911 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 NUDT1P36639 197 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 IDH2P48735 452 aaKnown RBP17.94■□□□□ 0.46
SMPD3-203ENST00000563226 ANXA11P50995 505 aaKnown RBP17.94■□□□□ 0.46
SMPD3-203ENST00000563226 CHRNEQ04844 493 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 LEXMQ3ZCV2 418 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 TMEM236Q5W0B7 351 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 OR6T1Q8NGN1 323 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 SCN3BQ9NY72 215 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 ZNF226Q9NYT6 803 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 POMT2Q9UKY4 750 aa17.94■□□□□ 0.46
SMPD3-203ENST00000563226 LAMA1P25391 3075 aa17.93■□□□□ 0.46
SMPD3-203ENST00000563226 A0A1W2PR77 199 aa17.93■□□□□ 0.46
SMPD3-203ENST00000563226 SOX1O00570 391 aaPredicted RBP17.93■□□□□ 0.46
SMPD3-203ENST00000563226 LDB3O75112 727 aa17.93■□□□□ 0.46
SMPD3-203ENST00000563226 H1F0P07305 194 aaKnown RBP17.93■□□□□ 0.46
SMPD3-203ENST00000563226 IL9P15248 144 aa17.93■□□□□ 0.46
SMPD3-203ENST00000563226 SH3BGRP55822 239 aaPredicted RBP17.93■□□□□ 0.46
SMPD3-203ENST00000563226 SLC35A4Q96G79 324 aa17.93■□□□□ 0.46
SMPD3-203ENST00000563226 ACTRT3Q9BYD9 372 aa17.93■□□□□ 0.46
SMPD3-203ENST00000563226 TMEM131Q92545 1883 aa17.93■□□□□ 0.46
SMPD3-203ENST00000563226 A0A0G2JPF8 293 aa17.92■□□□□ 0.46
SMPD3-203ENST00000563226 A0A1W2PPW3 197 aa17.92■□□□□ 0.46
SMPD3-203ENST00000563226 FAM170BA6NMN3 283 aa17.92■□□□□ 0.46
SMPD3-203ENST00000563226 HNRNPCL2B2RXH8 293 aa17.92■□□□□ 0.46
SMPD3-203ENST00000563226 HNRNPCL3B7ZW38 293 aa17.92■□□□□ 0.46
SMPD3-203ENST00000563226 ZSCAN9O15535 394 aaPredicted RBP17.92■□□□□ 0.46
SMPD3-203ENST00000563226 LGI1O95970 557 aa17.92■□□□□ 0.46
SMPD3-203ENST00000563226 HNRNPCL4P0DMR1 293 aa17.92■□□□□ 0.46
SMPD3-203ENST00000563226 CPMP14384 443 aa17.92■□□□□ 0.46
SMPD3-203ENST00000563226 SHC2P98077 582 aa17.92■□□□□ 0.46
SMPD3-203ENST00000563226 TUBA3CQ13748 450 aa17.92■□□□□ 0.46
SMPD3-203ENST00000563226 MFSD12Q6NUT3 480 aa17.92■□□□□ 0.46
SMPD3-203ENST00000563226 PARP8Q8N3A8 854 aa17.92■□□□□ 0.46
SMPD3-203ENST00000563226 SLC16A11Q8NCK7 471 aa17.92■□□□□ 0.46
SMPD3-203ENST00000563226 FUZQ9BT04 418 aa17.92■□□□□ 0.46
SMPD3-203ENST00000563226 BTBD2Q9BX70 525 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms