RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 SGSHP51688 502 aa4.36□□□□□ -1.71
LINC00557-201ENST00000563184 ZSWIM7Q19AV6 140 aa4.36□□□□□ -1.71
LINC00557-201ENST00000563184 ZNF699Q32M78 642 aa4.36□□□□□ -1.71
LINC00557-201ENST00000563184 CCDC40Q4G0X9 1142 aa4.36□□□□□ -1.71
LINC00557-201ENST00000563184 FAM219BQ5XKK7 198 aa4.36□□□□□ -1.71
LINC00557-201ENST00000563184 FAM159AQ6UWV7 190 aa4.36□□□□□ -1.71
LINC00557-201ENST00000563184 ADAMTSL5Q6ZMM2 481 aa4.36□□□□□ -1.71
LINC00557-201ENST00000563184 DPY19L2P2Q6ZN68 376 aa4.36□□□□□ -1.71
LINC00557-201ENST00000563184 LUZP1Q86V48 1076 aa4.36□□□□□ -1.71
LINC00557-201ENST00000563184 KDM8Q8N371 416 aa4.36□□□□□ -1.71
LINC00557-201ENST00000563184 ZNF397Q8NF99 534 aaPredicted RBP4.36□□□□□ -1.71
LINC00557-201ENST00000563184 OR6T1Q8NGN1 323 aa4.36□□□□□ -1.71
LINC00557-201ENST00000563184 ANKRD9Q96BM1 317 aaPredicted RBP4.36□□□□□ -1.71
LINC00557-201ENST00000563184 PSMB7Q99436 277 aa4.36□□□□□ -1.71
LINC00557-201ENST00000563184 PYGO2Q9BRQ0 406 aa4.36□□□□□ -1.71
LINC00557-201ENST00000563184 GPR174Q9BXC1 333 aa4.36□□□□□ -1.71
LINC00557-201ENST00000563184 IL20RAQ9UHF4 553 aa4.36□□□□□ -1.71
LINC00557-201ENST00000563184 ABCA7Q8IZY2 2146 aa4.36□□□□□ -1.71
LINC00557-201ENST00000563184 CYB561D2O14569 222 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 STK17BO94768 372 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 MT-ATP6P00846 226 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 TGFAP01135 160 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 CALML3P27482 149 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 SAA4P35542 130 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 ELK3P41970 407 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 MATKP42679 507 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 TAF6P49848 677 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 ATXN3P54252 364 aaPredicted RBP4.35□□□□□ -1.71
LINC00557-201ENST00000563184 NAAAQ02083 359 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 SHROOM1Q2M3G4 852 aaPredicted RBP4.35□□□□□ -1.71
LINC00557-201ENST00000563184 C14orf28Q4W4Y0 310 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 ACER2Q5QJU3 275 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 SEL1L2Q5TEA6 688 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 CNSTQ6PJW8 725 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 ATRAIDQ6UW56 229 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 CWC27Q6UX04 472 aaKnown RBP4.35□□□□□ -1.71
LINC00557-201ENST00000563184 PYROXD2Q8N2H3 581 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 HDDC3Q8N4P3 179 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 MLKLQ8NB16 471 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 DQX1Q8TE96 717 aaKnown RBP4.35□□□□□ -1.71
LINC00557-201ENST00000563184 MRPL38Q96DV4 380 aaKnown RBP4.35□□□□□ -1.71
LINC00557-201ENST00000563184 CCDC51Q96ER9 411 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 SAMD8Q96LT4 415 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 C19orf43Q9BQ61 176 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 HSD3B7Q9H2F3 369 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 FAM124BQ9H5Z6 455 aaPredicted RBP4.35□□□□□ -1.71
LINC00557-201ENST00000563184 ELL3Q9HB65 397 aaPredicted RBP4.35□□□□□ -1.71
LINC00557-201ENST00000563184 CNOT2Q9NZN8 540 aaKnown RBP4.35□□□□□ -1.71
LINC00557-201ENST00000563184 ZNF581Q9P0T4 197 aa4.35□□□□□ -1.71
LINC00557-201ENST00000563184 PIN4Q9Y237 131 aaKnown RBP4.35□□□□□ -1.71
LINC00557-201ENST00000563184 IGKV3D-20A0A0C4DH25 116 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 RNF103-CHMP3A0A140T963 221 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 KRT87PA6NCN2 255 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 BUB1O43683 1085 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 RANBP6O60518 1105 aaKnown RBP4.34□□□□□ -1.71
LINC00557-201ENST00000563184 SH3BGRLO75368 114 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 PPP2R1BP30154 601 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 HSPA1LP34931 641 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 MAGEA4P43358 317 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 VCPP55072 806 aaKnown RBP4.34□□□□□ -1.71
LINC00557-201ENST00000563184 HAND2P61296 217 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 IL1RL1Q01638 556 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 ZNF85Q03923 595 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 FUT7Q11130 342 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 BTG3Q14201 252 aaPredicted RBP4.34□□□□□ -1.71
LINC00557-201ENST00000563184 CD226Q15762 336 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 EIPR1Q53HC9 387 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 TAF3Q5VWG9 929 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 ABRAXAS1Q6UWZ7 409 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 TMEM26Q6ZUK4 368 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.34□□□□□ -1.71
LINC00557-201ENST00000563184 BEST4Q8NFU0 473 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 NDUFAF3Q9BU61 184 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 RPP25Q9BUL9 199 aaKnown RBP4.34□□□□□ -1.71
LINC00557-201ENST00000563184 ALG9Q9H6U8 611 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 AMBNQ9NP70 447 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.34□□□□□ -1.71
LINC00557-201ENST00000563184 DHRS4-AS1Q9P1J3 65 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 CLIP2Q9UDT6 1046 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 PLEKHA6Q9Y2H5 1048 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 UBE4BO95155 1302 aa4.34□□□□□ -1.71
LINC00557-201ENST00000563184 ZNF840PA6NDX5 716 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 ZNF354AO60765 605 aaPredicted RBP4.33□□□□□ -1.72
LINC00557-201ENST00000563184 ZNF253O75346 499 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 HPP00738 406 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 FAM200BP0CF97 657 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 IL10P22301 178 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 RPA1P27694 616 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 MFAP2P55001 183 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 GSTO1P78417 241 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 MYBPC1Q00872 1141 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 NME3Q13232 169 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 ABRAXAS2Q15018 415 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 LTB4RQ15722 352 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 LRIT3Q3SXY7 679 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 ACSF3Q4G176 576 aaPredicted RBP4.33□□□□□ -1.72
LINC00557-201ENST00000563184 HIGD2BQ4VC39 106 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 IL23RQ5VWK5 629 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 ZCCHC12Q6PEW1 402 aa4.33□□□□□ -1.72
LINC00557-201ENST00000563184 OLFM4Q6UX06 510 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms