RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 FGF9P31371 208 aaPredicted RBP12.35□□□□□ -0.43
USB1-207ENST00000563149 NKX2-5P52952 324 aaPredicted RBP12.35□□□□□ -0.43
USB1-207ENST00000563149 ARFIP1P53367 373 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 METAP1P53582 386 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 GAS1P54826 345 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 SNAPC1Q16533 368 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 MINDY4Q4G0A6 757 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 FNDC3BQ53EP0 1204 aaKnown RBP12.35□□□□□ -0.43
USB1-207ENST00000563149 DDI2Q5TDH0 399 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 ACSM5Q6NUN0 579 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 PAQR6Q6TCH4 344 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 UBE3DQ7Z6J8 389 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 IQCHQ86VS3 1027 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 RDH10Q8IZV5 341 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 SLC7A5P1Q8MH63 180 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 CELF5Q8N6W0 485 aaKnown RBP12.35□□□□□ -0.43
USB1-207ENST00000563149 NEDD4LQ96PU5 975 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 PHOX2BQ99453 314 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 COQ7Q99807 217 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 WFDC6Q9BQY6 131 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 MIXL1Q9H2W2 232 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 ANKRD19PQ9H560 264 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 ABCB9Q9NP78 766 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 SLC35C2Q9NQQ7 365 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 MAN2C1Q9NTJ4 1040 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 ZCCHC3Q9NUD5 404 aaKnown RBP12.35□□□□□ -0.43
USB1-207ENST00000563149 TEX10Q9NXF1 929 aaPredicted RBP12.35□□□□□ -0.43
USB1-207ENST00000563149 TRPC4Q9UBN4 977 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 FBXW2Q9UKT8 454 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 SF3B6Q9Y3B4 125 aaKnown RBP12.35□□□□□ -0.43
USB1-207ENST00000563149 SPIN1Q9Y657 262 aaPredicted RBP12.35□□□□□ -0.43
USB1-207ENST00000563149 DENND4AQ7Z401 1863 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 CCDC88CQ9P219 2028 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 A0A1W2PQ09 198 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 FEZF1A0PJY2 475 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 MEIOCA2RUB1 952 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 CENPXA8MT69 81 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 H7BY64 318 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 M0R3H8 397 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 PLD2O14939 933 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 OR1F1O43749 312 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 GUCY1B2O75343 617 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 CYP7B1O75881 506 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 MSL3P1P0C860 447 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 TAS2R38P59533 333 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 ERVFC1P60507 584 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 CSNK1G2P78368 415 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 HNRNPA0Q13151 305 aaKnown RBP12.34□□□□□ -0.43
USB1-207ENST00000563149 ZFP69Q49AA0 526 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 ZMAT1Q5H9K5 638 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 ATAT1Q5SQI0 421 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 PDZK1Q5T2W1 519 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 KIAA1161Q6NSJ0 714 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 SLC27A4Q6P1M0 643 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 METAP1DQ6UB28 335 aaPredicted RBP12.34□□□□□ -0.43
USB1-207ENST00000563149 QSOX2Q6ZRP7 698 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 BCDIN3DQ7Z5W3 292 aaKnown RBP12.34□□□□□ -0.43
USB1-207ENST00000563149 VWA5B2Q8N398 1253 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 IQCF1Q8N6M8 205 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 TEX47Q8TBZ9 253 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 ZNF296Q8WUU4 475 aaPredicted RBP12.34□□□□□ -0.43
USB1-207ENST00000563149 UFD1Q92890 307 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 TP53INP1Q96A56 240 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 ST6GAL2Q96JF0 529 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 ZSWIM3Q96MP5 696 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 PRAP1Q96NZ9 151 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 SLC38A2Q96QD8 506 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 DPH7Q9BTV6 452 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 C5AR2Q9P296 337 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 TMEM98Q9Y2Y6 226 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 PLXND1Q9Y4D7 1925 aa12.34□□□□□ -0.43
USB1-207ENST00000563149 A0A1W2PQL4 384 aaPredicted RBP12.33□□□□□ -0.44
USB1-207ENST00000563149 CCDC182A6NF36 153 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 HIDE1A8MVS5 230 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 KDM4EB2RXH2 506 aaPredicted RBP12.33□□□□□ -0.44
USB1-207ENST00000563149 GPR89AB7ZAQ6 455 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 EPPINO95925 133 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 GPR89BP0CG08 455 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 GABRA5P31644 462 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 IFNA8P32881 189 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 RCVRNP35243 200 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 SSR2P43308 183 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 MNX1P50219 401 aaPredicted RBP12.33□□□□□ -0.44
USB1-207ENST00000563149 PPP3R1P63098 170 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 HTRA4P83105 476 aaPredicted RBP12.33□□□□□ -0.44
USB1-207ENST00000563149 HYAL2Q12891 473 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 TSPAN31Q12999 210 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 SLC35F1Q5T1Q4 408 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 NDUFAF5Q5TEU4 345 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 NXNL2Q5VZ03 156 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 C22orf42Q6IC83 251 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 CD200R1LQ6Q8B3 271 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 RASSF6Q6ZTQ3 369 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 C12orf40Q86WS4 652 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 ETFBKMTQ8IXQ9 262 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 PLA2G15Q8NCC3 412 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 OR56A1Q8NGH5 318 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 OR6T1Q8NGN1 323 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 RNFT2Q96EX2 444 aa12.33□□□□□ -0.44
USB1-207ENST00000563149 DIRAS2Q96HU8 199 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms