RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 DNAJC27Q9NZQ0 273 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 SNX11Q9Y5W9 270 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 COMMD10Q9Y6G5 202 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 TP53BP1Q12888 1972 aaPredicted RBP13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 CEP290O15078 2479 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 LRATO95237 230 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 CXCL14O95715 111 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 LRG1P02750 347 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 PIPP12273 146 aaPredicted RBP13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 RPS7P62081 194 aaKnown RBP13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 LMAN2Q12907 356 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 METAP1DQ6UB28 335 aaPredicted RBP13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 USP30Q70CQ3 517 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 TSEN54Q7Z6J9 526 aaKnown RBP13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 NKAPQ8N5F7 415 aaKnown RBP13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 MRPS31Q92665 395 aaKnown RBP13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 INTS12Q96CB8 462 aaKnown RBP13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 SFXN2Q96NB2 322 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 BOCQ9BWV1 1114 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 ABCG5Q9H222 651 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 DLL4Q9NR61 685 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 PFDN2Q9UHV9 154 aa13.3□□□□□ -0.28
GTF3C1-203ENST00000562609 MYO9BQ13459 2157 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 PIKFYVEQ9Y2I7 2098 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 HIDE1A8MVS5 230 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 ADAMDEC1O15204 470 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 SUV39H1O43463 412 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 LANCL1O43813 399 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 DPM1O60762 260 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 CLDN7O95471 211 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 RECQLP46063 649 aaPredicted RBP13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 MPEG1Q2M385 716 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 GPR33Q49SQ1 333 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 C3P1Q6ZMU1 363 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 Q6ZNB5 142 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 CDH26Q8IXH8 852 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 RGL4Q8IZJ4 473 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 NANOGP1Q8N7R0 232 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 OR2T35Q8NGX2 323 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 COQ8AQ8NI60 647 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 TCEAL4Q96EI5 215 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 TSSK3Q96PN8 268 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 SLC46A2Q9BY10 475 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 PITHD1Q9GZP4 211 aaPredicted RBP13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 CRISPLD2Q9H0B8 497 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 CD93Q9NPY3 652 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 NDUFAF4Q9P032 175 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 CXXC1Q9P0U4 656 aaPredicted RBP13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 PLXNA4Q9HCM2 1894 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 CASKO14936 926 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 SULT1B1O43704 296 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 OTCP00480 354 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 PKMP14618 531 aaKnown RBP13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 BDKRB1P46663 353 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 GDI2P50395 445 aaKnown RBP13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 RPS14P62263 151 aaKnown RBP13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 CAMK1Q14012 370 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 OPCMLQ14982 345 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 CRTC2Q53ET0 693 aaPredicted RBP13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 MPPE1Q53F39 396 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 CORO6Q6QEF8 472 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 MAMSTRQ6ZN01 415 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 CCDC36Q8IYA8 594 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 OR4D10Q8NGI6 311 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 SCRN2Q96FV2 425 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 SLC38A2Q96QD8 506 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 H2AFJQ9BTM1 129 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 SLC19A3Q9BZV2 496 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 MLXQ9UH92 298 aa13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 SPIN1Q9Y657 262 aaPredicted RBP13.29□□□□□ -0.28
GTF3C1-203ENST00000562609 TEX13CA0A0J9YWL9 993 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 GPR171O14626 319 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 SIGLEC5O15389 551 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 SSX5O60225 188 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 MPZL2O60487 215 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 NCR1O76036 304 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 APOL3O95236 402 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 TIMP1P01033 207 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 NMBP08949 121 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 POU3F2P20265 443 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 CRYBA2P53672 197 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 KIAA1024LP59773 190 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 SIGLEC14Q08ET2 396 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 ARMC12Q5T9G4 340 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 TMEM91Q6ZNR0 172 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 NLRC3Q7RTR2 1065 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 SAMD14Q8IZD0 417 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 BEST4Q8NFU0 473 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 SENP5Q96HI0 755 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 C11orf16Q9NQ32 467 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 IL17CQ9P0M4 197 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 DLGAP4Q9Y2H0 992 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 RNF215Q9Y6U7 377 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 OBSL1O75147 1896 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 DNAH14Q0VDD8 3507 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 MEIKINA0A087WXM9 373 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 A0A0B4J203 849 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 A0A1B0GVI7 797 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 H7C2Y5 167 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 SIGLEC6O43699 453 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms