RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 ERCC2P18074 760 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 CD53P19397 219 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 TAC1P20366 129 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 TACR3P29371 465 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 CRABP2P29373 138 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 SSTR1P30872 391 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 RPA3P35244 121 aaPredicted RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 IDUAP35475 653 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 GP5P40197 560 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 PAPOLAP51003 745 aaKnown RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 KPNA2P52292 529 aaKnown RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 GEMP55040 296 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 GFERP55789 205 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 DLX5P56178 289 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 YBEYP58557 167 aaPredicted RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 GPX6P59796 221 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 GBE1Q04446 702 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 SLC18A2Q05940 514 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 TFF3Q07654 80 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 SLC20A2Q08357 652 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 CDH17Q12864 832 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 SLC10A2Q12908 348 aaPredicted RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 RIPK1Q13546 671 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 SLC12A1Q13621 1099 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 SEC23BQ15437 767 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 CA9Q16790 459 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 TBRG1Q3YBR2 411 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 FAM174BQ3ZCQ3 159 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 KBTBD12Q3ZCT8 623 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 PARP15Q460N3 678 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 CCDC153Q494R4 210 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 TEX44Q53QW1 395 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 CEP78Q5JTW2 689 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 AGAP7PQ5VUJ5 663 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 SYPL2Q5VXT5 272 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 ANKRD22Q5VYY1 191 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 STEAP4Q687X5 459 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 NCBP2-AS2Q69YL0 99 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 HEPHL1Q6MZM0 1159 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 TRNP1Q6NT89 227 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 RPUSD3Q6P087 351 aaKnown RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 CASC4Q6P4E1 433 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 ARSKQ6UWY0 536 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 MARK2Q7KZI7 788 aaKnown RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 TFAP2DQ7Z6R9 452 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 FAM131BQ86XD5 332 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 DOLPP1Q86YN1 238 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 RAB43Q86YS6 212 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 UEVLDQ8IX04 471 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 LMNTD2Q8IXW0 634 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 LAS2Q8IYD9 372 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 BBS5Q8N3I7 341 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 RYBPQ8N488 228 aaPredicted RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 CPSF7Q8N684 471 aaKnown RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 CCDC185Q8N715 623 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 ATP6V0D2Q8N8Y2 350 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 SEMA6DQ8NFY4 1073 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 LILRB4Q8NHJ6 448 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 CEP70Q8NHQ1 597 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 CFAP61Q8NHU2 1237 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 CCDC110Q8TBZ0 833 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 MAGEC3Q8TD91 643 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 CXorf40AQ8TE69 158 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 AGAP11Q8TF27 550 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 SCARB1Q8WTV0 552 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 DCAKDQ8WVC6 231 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 ZNF75CPQ92670 426 aaPredicted RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 DPF1Q92782 380 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 PEX13Q92968 403 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 TBC1D31Q96DN5 1066 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 CFAP36Q96G28 342 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 APOPT1Q96IL0 206 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 MAGED4Q96JG8 741 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 BTN2A3PQ96KV6 586 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 ZNF599Q96NL3 588 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 AGAP4Q96P64 663 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 TGM7Q96PF1 710 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 TMEM237Q96Q45 408 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 FCRL5Q96RD9 977 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 CPNE1Q99829 537 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 FAM118BQ9BPY3 351 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 PAIP2Q9BPZ3 127 aaKnown RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 TM2D2Q9BX73 214 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 TBC1D10AQ9BXI6 508 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 GSDMCQ9BYG8 508 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 TKTL2Q9H0I9 626 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 GBA3Q9H227 469 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 STN1Q9H668 368 aaKnown RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 PLEKHA2Q9HB19 425 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 WASH6PQ9NQA3 447 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 SAR1AQ9NR31 198 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 PIGVQ9NUD9 493 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 THAP1Q9NVV9 213 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 BEX4Q9NWD9 120 aaPredicted RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 GAR1Q9NY12 217 aaKnown RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 SEMA5BQ9P283 1151 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 KLHL13Q9P2N7 655 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 VPS28Q9UK41 221 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 RARRES3Q9UL19 164 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms