RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 NXF5Q9H1B4 397 aaKnown RBP14.85□□□□□ -0.03
SNX1-213ENST00000561026 UBQLN3Q9H347 655 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 NMRK1Q9NWW6 199 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 ZNF225Q9UK10 706 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 A0A087WUV0 522 aaPredicted RBP14.85□□□□□ -0.03
SNX1-213ENST00000561026 HSPB2A8KAH6 182 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 HPNP05981 417 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 ABCB1P08183 1280 aaPredicted RBP14.85□□□□□ -0.03
SNX1-213ENST00000561026 SNRPAP09012 282 aaKnown RBP14.85□□□□□ -0.03
SNX1-213ENST00000561026 NAGAP17050 411 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 CSNK2A2P19784 350 aaPredicted RBP14.85□□□□□ -0.03
SNX1-213ENST00000561026 HSD17B3P37058 310 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 FEN1P39748 380 aaKnown RBP14.85□□□□□ -0.03
SNX1-213ENST00000561026 CDK9P50750 372 aaKnown RBP14.85□□□□□ -0.03
SNX1-213ENST00000561026 CRYZQ08257 329 aaKnown RBP14.85□□□□□ -0.03
SNX1-213ENST00000561026 HSPB2Q16082 182 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 FAM111BQ6SJ93 734 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 WDR53Q7Z5U6 358 aaPredicted RBP14.85□□□□□ -0.03
SNX1-213ENST00000561026 MMP21Q8N119 569 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 ZNF592Q92610 1267 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 NTNG2Q96CW9 530 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 MAT2BQ9NZL9 334 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 ZNF639Q9UID6 485 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 PSME2Q9UL46 239 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 CFL2Q9Y281 166 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 DTX4Q9Y2E6 619 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 L3MBTL1Q9Y468 752 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 ERAL1O75616 437 aaKnown RBP14.84□□□□□ -0.03
SNX1-213ENST00000561026 EPPINO95925 133 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 CTAGE8P0CG41 777 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 KRT15P19012 456 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 SOX18P35713 384 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 MASP1P48740 699 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 CLCQ05315 142 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 ACSF3Q4G176 576 aaPredicted RBP14.84□□□□□ -0.03
SNX1-213ENST00000561026 TEX35Q5T0J7 233 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 LGSNQ5TDP6 509 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 ARSKQ6UWY0 536 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 TIFABQ6ZNK6 161 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 TMEM200AQ86VY9 491 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 CTAGE4Q8IX94 777 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 CTHRC1Q96CG8 243 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 TMEM41AQ96HV5 264 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 HBEGFQ99075 208 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 FAIM2Q9BWQ8 316 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 BRINP2Q9C0B6 783 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 VPS29Q9UBQ0 182 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 TRPS1Q9UHF7 1281 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 C15orf41Q9Y2V0 281 aa14.84□□□□□ -0.03
SNX1-213ENST00000561026 EXOC1LA0A1B0GW35 172 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 SYT5O00445 386 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 CDH16O75309 829 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 PPM1BO75688 479 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 OR4F21O95013 312 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 FREM3P0C091 2139 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 CEACAM8P31997 349 aaPredicted RBP14.83□□□□□ -0.04
SNX1-213ENST00000561026 TIMP3P35625 211 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 TRA2BP62995 288 aaKnown RBP14.83□□□□□ -0.04
SNX1-213ENST00000561026 EXOSC7Q15024 291 aaKnown RBP14.83□□□□□ -0.04
SNX1-213ENST00000561026 NNATQ16517 81 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 NHSL2Q5HYW2 709 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 FAM219BQ5XKK7 198 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 TIGD3Q6B0B8 471 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 VASNQ6EMK4 673 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 PM20D2Q8IYS1 436 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 C1orf52Q8N6N3 182 aaKnown RBP14.83□□□□□ -0.04
SNX1-213ENST00000561026 CDYL2Q8N8U2 506 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 NAXEQ8NCW5 288 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 SIMC1Q8NDZ2 872 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 ADCY4Q8NFM4 1077 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 KLHL29Q96CT2 875 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 ZNF681Q96N22 645 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 ITPAQ9BY32 194 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 PRDM14Q9GZV8 571 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 METTL7AQ9H8H3 244 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 BCAP29Q9UHQ4 241 aa14.83□□□□□ -0.04
SNX1-213ENST00000561026 ANKHD1Q8IWZ3 2542 aaKnown RBP14.82□□□□□ -0.04
SNX1-213ENST00000561026 MANBAO00462 879 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 ACOX3O15254 700 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 SUPT7LO94864 414 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 ZWINTO95229 277 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 CBX7O95931 251 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 KRT6AP02538 564 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 KRT6BP04259 564 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 HSD3B1P14060 373 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 TAC1P20366 129 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 HSD3B2P26439 372 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 GCAP28676 217 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 PTPN6P29350 595 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 KRT6CP48668 564 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 ALDH9A1P49189 494 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 DUSP2Q05923 314 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 RASA2Q15283 850 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 SF3B4Q15427 424 aaKnown RBP eCLIP14.82□□□□□ -0.04
SNX1-213ENST00000561026 TRMT12Q53H54 448 aaKnown RBP14.82□□□□□ -0.04
SNX1-213ENST00000561026 EIPR1Q53HC9 387 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 UNC50Q53HI1 259 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 TCHHL1Q5QJ38 904 aaPredicted RBP14.82□□□□□ -0.04
SNX1-213ENST00000561026 ZNF678Q5SXM1 525 aa14.82□□□□□ -0.04
SNX1-213ENST00000561026 FAM180BQ6P0A1 224 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms