RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 TRIM64A6NGJ6 449 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 A8MVJ9 347 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 H0YIG0 161 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 H3BNH8 94 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 SLC16A6O15403 523 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 YKT6O15498 198 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 HRO43593 1189 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 JRKO75564 520 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 BMP10O95393 424 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 MSL3P1P0C860 447 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 IGFBP5P24593 272 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 CD1CP29017 333 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 HOXD12P35452 270 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 LIMS1P48059 325 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 PPM1FP49593 454 aaPredicted RBP12.09□□□□□ -0.47
SNX1-211ENST00000560829 DAPP51397 102 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 HSD11B2P80365 405 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 MGAT2Q10469 447 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 KCNAB2Q13303 367 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 APOFQ13790 326 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 GRM7Q14831 915 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 PRICKLE4Q2TBC4 344 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 ZIK1Q3SY52 487 aaPredicted RBP12.09□□□□□ -0.47
SNX1-211ENST00000560829 HEPHL1Q6MZM0 1159 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 WDR74Q6RFH5 385 aaPredicted RBP12.09□□□□□ -0.47
SNX1-211ENST00000560829 KMT5CQ86Y97 462 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 ZNF595Q8IYB9 648 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 SAP25Q8TEE9 199 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 PROX1Q92786 737 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 CTHRC1Q96CG8 243 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 SLC41A2Q96JW4 573 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 ANKRA2Q9H9E1 313 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 PDP1Q9P0J1 537 aaPredicted RBP12.09□□□□□ -0.47
SNX1-211ENST00000560829 SEC14L3Q9UDX4 400 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 CLCA2Q9UQC9 943 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 MRPS33Q9Y291 106 aaKnown RBP12.09□□□□□ -0.47
SNX1-211ENST00000560829 MYRFQ9Y2G1 1151 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 ORC6Q9Y5N6 252 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 KCNE3Q9Y6H6 103 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 TMEM131Q92545 1883 aa12.09□□□□□ -0.47
SNX1-211ENST00000560829 TNFRSF11BO00300 401 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 CLIC3O95833 236 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 ITGAMP11215 1152 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 CSF2RBP32927 897 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 IGLV3-21P80748 117 aaPredicted RBP12.08□□□□□ -0.48
SNX1-211ENST00000560829 ID2Q02363 134 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 SQSTM1Q13501 440 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 LAPTM4AQ15012 233 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 FAM214AQ32MH5 1076 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 KCTD21Q4G0X4 260 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 TRMT12Q53H54 448 aaKnown RBP12.08□□□□□ -0.48
SNX1-211ENST00000560829 ATAD3BQ5T9A4 648 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 ZCCHC12Q6PEW1 402 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 D2HGDHQ8N465 521 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 PIK3C3Q8NEB9 887 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 OR4C6Q8NH72 309 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 ADAMTS15Q8TE58 950 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 OTUB1Q96FW1 271 aaPredicted RBP12.08□□□□□ -0.48
SNX1-211ENST00000560829 RMND5BQ96G75 393 aaPredicted RBP12.08□□□□□ -0.48
SNX1-211ENST00000560829 SLC35A4Q96G79 324 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 MUS81Q96NY9 551 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 PSD2Q9BQI7 771 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 MRPS26Q9BYN8 205 aaKnown RBP12.08□□□□□ -0.48
SNX1-211ENST00000560829 SLC38A1Q9H2H9 487 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 EQTNQ9NQ60 294 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 MAT2BQ9NZL9 334 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 FBXO4Q9UKT5 387 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 TESMINQ9Y4I5 508 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 SPAG17Q6Q759 2223 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 CASC3O15234 703 aaKnown RBP12.08□□□□□ -0.48
SNX1-211ENST00000560829 CTNSO60931 367 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 PIGAP37287 484 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 GCGRP47871 477 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 AVPR1BP47901 424 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 SPIBQ01892 262 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 IL18R1Q13478 541 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 CYP27C1Q4G0S4 372 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 MED25Q71SY5 747 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 OFCC1Q8IZS5 231 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 SLC16A11Q8NCK7 471 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 ZNF555Q8NEP9 628 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 PIGKQ92643 395 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 DHRS1Q96LJ7 313 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 YTHDF1Q9BYJ9 559 aaKnown RBP12.08□□□□□ -0.48
SNX1-211ENST00000560829 SPRTNQ9H040 489 aaPredicted RBP12.08□□□□□ -0.48
SNX1-211ENST00000560829 ACER3Q9NUN7 267 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 KLHL3Q9UH77 587 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 FAM32AQ9Y421 112 aaKnown RBP12.08□□□□□ -0.48
SNX1-211ENST00000560829 VCANP13611 3396 aa12.08□□□□□ -0.48
SNX1-211ENST00000560829 CEP192Q8TEP8 1941 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 ARRDC5A6NEK1 342 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 E9PQ18 207 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 J3KTA2 159 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 SYT5O00445 386 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 TOX3O15405 576 aaPredicted RBP12.07□□□□□ -0.48
SNX1-211ENST00000560829 PCDHGA12O60330 932 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 NT5EP21589 574 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 CNR2P34972 360 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 MAP3K8P41279 467 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 RPS6KA3P51812 740 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms