RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 DHX15O43143 795 aaKnown RBP6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 SMAD6O43541 496 aaKnown RBP6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 XPNPEP2O43895 674 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 AIREO43918 545 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 SELENOFO60613 162 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 MRPS14O60783 128 aaKnown RBP6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 PGLSO95336 258 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 LYPLA2O95372 231 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 APRTP07741 180 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 FAHP16930 419 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 CTPS1P17812 591 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 ACO1P21399 889 aaKnown RBP6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 KDELR1P24390 212 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 PIGAP37287 484 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 VIPR2P41587 438 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 BRCC3P46736 316 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 AKR1D1P51857 326 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 OAZ1P54368 228 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 OGDHQ02218 1023 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 GRIK2Q13002 908 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 ARMCX4Q5H9R4 360 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 ZNF691Q5VV52 312 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 SEM1Q6ZVN7 128 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 FAM214BQ7L5A3 538 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 STK32CQ86UX6 486 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 TMC8Q8IU68 726 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 BATF2Q8N1L9 274 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 GDPD1Q8N9F7 314 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 DNERQ8NFT8 737 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 OR4D10Q8NGI6 311 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 TRMT61AQ96FX7 289 aaKnown RBP6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 ZSWIM3Q96MP5 696 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 TMEM245Q9H330 911 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 RANBP3Q9H6Z4 567 aaPredicted RBP6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 RNF121Q9H920 327 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 ACOT13Q9NPJ3 140 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 SIDT1Q9NXL6 827 aaKnown RBP6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 USE1Q9NZ43 259 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 CFAP97Q9P2B7 532 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 LOC285556D6RIA3 1793 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 BBIP1A8MTZ0 92 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 ABCD4O14678 606 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 HS6ST1O60243 411 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 STAG3L3P0CL85 134 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 POU2F1P14859 743 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 ANXA7P20073 488 aaKnown RBP6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 PGDP52209 483 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 RPL15P61313 204 aaKnown RBP6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 SLC35A2P78381 396 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 SRSF11Q05519 484 aaKnown RBP6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 IL18R1Q13478 541 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 GTDC1Q4AE62 458 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 PYCR3Q53H96 274 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 ZMAT1Q5H9K5 638 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 PDSS1Q5T2R2 415 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 KDM4DQ6B0I6 523 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 FAM180AQ6UWF9 173 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 NHLRC1Q6VVB1 395 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 ZNF534Q76KX8 674 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 OTOP2Q7RTS6 562 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 BMP8AQ7Z5Y6 402 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 CLEC14AQ86T13 490 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 TRIM48Q8IWZ4 208 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 TIGD4Q8IY51 512 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 FBXL13Q8NEE6 735 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 KBTBD8Q8NFY9 601 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 LPPQ93052 612 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 UBE2FQ969M7 185 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 RTP4Q96DX8 246 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 MOCOSQ96EN8 888 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 MCEEQ96PE7 176 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 ACOX2Q99424 681 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 CD180Q99467 661 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 NPAS1Q99742 590 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 CBWD1Q9BRT8 395 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 RACGAP1Q9H0H5 632 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 FZD8Q9H461 694 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 NMRAL1Q9HBL8 299 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 BARX1Q9HBU1 254 aaPredicted RBP6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 WRAP73Q9P2S5 460 aaPredicted RBP6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 SLC9A2Q9UBY0 812 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 ADAMTS5Q9UNA0 930 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 TPRKBQ9Y3C4 175 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 WDR90Q96KV7 1748 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 TCRBV5S1A1TA0A578 114 aa6.36□□□□□ -1.39
TSPAN3-209ENST00000560715 C1orf226A1L170 272 aa6.36□□□□□ -1.39
TSPAN3-209ENST00000560715 C17orf102A2RUQ5 167 aa6.36□□□□□ -1.39
TSPAN3-209ENST00000560715 GAGE10A6NGK3 116 aa6.36□□□□□ -1.39
TSPAN3-209ENST00000560715 PRMT5O14744 637 aaPredicted RBP6.36□□□□□ -1.39
TSPAN3-209ENST00000560715 TO15178 435 aa6.36□□□□□ -1.39
TSPAN3-209ENST00000560715 UBDO15205 165 aa6.36□□□□□ -1.39
TSPAN3-209ENST00000560715 PAPSS2O95340 614 aaPredicted RBP6.36□□□□□ -1.39
TSPAN3-209ENST00000560715 MT-ND1P03886 318 aa6.36□□□□□ -1.39
TSPAN3-209ENST00000560715 SLC2A4P14672 509 aa6.36□□□□□ -1.39
TSPAN3-209ENST00000560715 CPN2P22792 545 aa6.36□□□□□ -1.39
TSPAN3-209ENST00000560715 RPS3P23396 243 aaKnown RBP eCLIP6.36□□□□□ -1.392e-7■■■□□ 17.4
TSPAN3-209ENST00000560715 SLC6A2P23975 617 aa6.36□□□□□ -1.39
TSPAN3-209ENST00000560715 APEX1P27695 318 aaKnown RBP6.36□□□□□ -1.39
TSPAN3-209ENST00000560715 FRKP42685 505 aaPredicted RBP6.36□□□□□ -1.39
TSPAN3-209ENST00000560715 SLC25A11Q02978 314 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms