RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 SLC25A19Q9HC21 320 aa18.16■□□□□ 0.5
SEMA4B-215ENST00000560089 SERHLQ9NQF3 203 aa18.16■□□□□ 0.5
SEMA4B-215ENST00000560089 GPR31O00270 319 aa18.16■□□□□ 0.5
SEMA4B-215ENST00000560089 SLC19A2O60779 497 aa18.16■□□□□ 0.5
SEMA4B-215ENST00000560089 B3GALT4O96024 378 aa18.16■□□□□ 0.5
SEMA4B-215ENST00000560089 HPP00738 406 aa18.16■□□□□ 0.5
SEMA4B-215ENST00000560089 HMBSP08397 361 aa18.16■□□□□ 0.5
SEMA4B-215ENST00000560089 ELK1P19419 428 aa18.16■□□□□ 0.5
SEMA4B-215ENST00000560089 PAICSP22234 425 aaKnown RBP18.16■□□□□ 0.5
SEMA4B-215ENST00000560089 CST5P28325 142 aaPredicted RBP18.16■□□□□ 0.5
SEMA4B-215ENST00000560089 LDLRAD3Q86YD5 345 aa18.16■□□□□ 0.5
SEMA4B-215ENST00000560089 ZNF687Q8N1G0 1237 aa18.16■□□□□ 0.5
SEMA4B-215ENST00000560089 DMBX1Q8NFW5 382 aa18.16■□□□□ 0.5
SEMA4B-215ENST00000560089 FAM193BQ96PV7 902 aaPredicted RBP18.16■□□□□ 0.5
SEMA4B-215ENST00000560089 CPEB1Q9BZB8 566 aaKnown RBP18.16■□□□□ 0.5
SEMA4B-215ENST00000560089 MFSD1Q9H3U5 465 aa18.16■□□□□ 0.5
SEMA4B-215ENST00000560089 PPP1R14DQ9NXH3 145 aa18.16■□□□□ 0.5
SEMA4B-215ENST00000560089 POM121BA6NF01 834 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 CXCR3P49682 368 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 NR0B1P51843 470 aaKnown RBP18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 DHODHQ02127 395 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 PLK5Q496M5 336 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 MPPE1Q53F39 396 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 C9orf152Q5JTZ5 239 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 PAQR3Q6TCH7 311 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 DEF8Q6ZN54 512 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 SERPINA11Q86U17 422 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 TMEM17Q86X19 198 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 OR14A16Q8NHC5 309 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 TRIM43Q96BQ3 446 aaPredicted RBP18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 PEX11GQ96HA9 241 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 TMEM68Q96MH6 324 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 TSGA13Q96PP4 275 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 CACNG6Q9BXT2 260 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 CFAP97Q9P2B7 532 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 A0A1B0GW55 424 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 OR6C68A6NDL8 312 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 ARHGEF33A8MVX0 844 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 MCRIP1C9JLW8 97 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 POMCP01189 267 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 DUX4L2P0CJ85 424 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 DUX4L3P0CJ86 424 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 DUX4L4P0CJ87 422 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 DUX4L5P0CJ88 424 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 DUX4L6P0CJ89 424 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 DUX4L7P0CJ90 424 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 CDH12P55289 794 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 SPIBQ01892 262 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 LYPD4Q6UWN0 246 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 OXR1Q8N573 874 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 GOT1L1Q8NHS2 421 aaPredicted RBP18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 SPATA5L1Q9BVQ7 753 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 DERL2Q9GZP9 239 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 TAS2R3Q9NYW6 316 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 DUX4Q9UBX2 424 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 CHST2Q9Y4C5 530 aa18.15■□□□□ 0.5
SEMA4B-215ENST00000560089 GABRR3A8MPY1 467 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 GPR37O15354 613 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 PRKRAO75569 313 aaKnown RBP18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 C1QCP02747 245 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 HPXP02790 462 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 S100A11P31949 105 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 S100A3P33764 101 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 SUOXP51687 545 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 KCNJ10P78508 379 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 FAM189BP81408 668 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 IL10RBQ08334 325 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 ATAT1Q5SQI0 421 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 ALKAL1Q6UXT8 129 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 NAXDQ8IW45 347 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 SPPL2AQ8TCT8 520 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 NR4A3Q92570 626 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 NPY6RQ99463 290 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.14■□□□□ 0.53e-12■■■■□ 26.6
SEMA4B-215ENST00000560089 OSGEPL1Q9H4B0 414 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 POPDC3Q9HBV1 291 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 SLC6A20Q9NP91 592 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 IMP3Q9NV31 184 aaKnown RBP18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 FAM50BQ9Y247 325 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 SNX10Q9Y5X0 201 aa18.14■□□□□ 0.5
SEMA4B-215ENST00000560089 LAMA3Q16787 3333 aa18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 A0A1B0GWJ7 208 aa18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 CLN5O75503 358 aa18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 RECKO95980 971 aa18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 SPI1P17947 270 aa18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 SLC6A4P31645 630 aa18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 CCR6P51684 374 aa18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 DGKEP52429 567 aa18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 NUBP1P53384 320 aa18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 RAB8AP61006 207 aa18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 DEFA6Q01524 100 aa18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 MAD2L1Q13257 205 aaPredicted RBP18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 KLHL26Q53HC5 615 aa18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 OR2B11Q5JQS5 317 aa18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 FBXO47Q5MNV8 452 aa18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 QSOX2Q6ZRP7 698 aa18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 DUSP16Q9BY84 665 aa18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 GHRLQ9UBU3 117 aa18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 RAI2Q9Y5P3 530 aa18.14■□□□□ 0.49
SEMA4B-215ENST00000560089 A0A0U1RQF3 1178 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms