RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 TMEM131Q92545 1883 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 ZDBF2Q9HCK1 2354 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 ADAMDEC1O15204 470 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 TOX3O15405 576 aaPredicted RBP11.88□□□□□ -0.51
USP3-213ENST00000559711 CTNSO60931 367 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 DNAJB5O75953 348 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 BMP10O95393 424 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 AGR2O95994 175 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 FESP07332 822 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 CHRM4P08173 479 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 GNAO1P09471 354 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 NELFEP18615 380 aaKnown RBP11.88□□□□□ -0.51
USP3-213ENST00000559711 XCR1P46094 333 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 GCGRP47871 477 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 OR1E2P47887 323 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 AVPR1BP47901 424 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 MAPK10P53779 464 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 IGLV3-21P80748 117 aaPredicted RBP11.88□□□□□ -0.51
USP3-213ENST00000559711 MYBPC1Q00872 1141 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 EPS8Q12929 822 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 PUM1Q14671 1186 aaKnown RBP eCLIP11.88□□□□□ -0.51
USP3-213ENST00000559711 KCNAB1Q14722 419 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 PRICKLE4Q2TBC4 344 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 FAM214AQ32MH5 1076 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 TRMT12Q53H54 448 aaKnown RBP11.88□□□□□ -0.51
USP3-213ENST00000559711 HEPHL1Q6MZM0 1159 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 GPR32P1Q8NGA4 272 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 CYGBQ8WWM9 190 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 SLC35A4Q96G79 324 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 COL21A1Q96P44 957 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 SPATA5L1Q9BVQ7 753 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 AMBRA1Q9C0C7 1298 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 GAREM1Q9H706 876 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 FSCN3Q9NQT6 498 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 GIN1Q9NXP7 522 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 HCN3Q9P1Z3 774 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 TMEFF2Q9UIK5 374 aaPredicted RBP11.88□□□□□ -0.51
USP3-213ENST00000559711 MRPS33Q9Y291 106 aaKnown RBP11.88□□□□□ -0.51
USP3-213ENST00000559711 ENPP4Q9Y6X5 453 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 CABIN1Q9Y6J0 2220 aa11.88□□□□□ -0.51
USP3-213ENST00000559711 SIGLEC6O43699 453 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 PCDHGA12O60330 932 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 TNFAIP8O95379 198 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 ALBP02768 609 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 IFNW1P05000 195 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 CFIP05156 583 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 ARL4DP49703 201 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 SEPHS1P49903 392 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 GTF2A1P52655 376 aaPredicted RBP11.87□□□□□ -0.51
USP3-213ENST00000559711 HMGA2P52926 109 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 MAP4K2Q12851 820 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 RFX4Q33E94 735 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 ZNF528Q3MIS6 628 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 ATAD3BQ5T9A4 648 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 TMEM71Q6P5X7 295 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 ZCCHC12Q6PEW1 402 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 MED25Q71SY5 747 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 ZNF605Q86T29 641 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 SLC16A11Q8NCK7 471 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 ADAMTS15Q8TE58 950 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 MVB12AQ96EY5 273 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 MMABQ96EY8 250 aaPredicted RBP11.87□□□□□ -0.51
USP3-213ENST00000559711 OTUB1Q96FW1 271 aaPredicted RBP11.87□□□□□ -0.51
USP3-213ENST00000559711 ZNF354BQ96LW1 612 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 BARD1Q99728 777 aaKnown RBP11.87□□□□□ -0.51
USP3-213ENST00000559711 ZNF696Q9H7X3 374 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 EQTNQ9NQ60 294 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 EXD2Q9NVH0 621 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 IRAK4Q9NWZ3 460 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 MAT2BQ9NZL9 334 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 CALML5Q9NZT1 146 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 SEC14L3Q9UDX4 400 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 SH3GLB1Q9Y371 365 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 LYVE1Q9Y5Y7 322 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 SCN3AQ9NY46 2000 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 MYOCOSA0A1B0GUC4 107 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 EME2A4GXA9 379 aaPredicted RBP11.87□□□□□ -0.51
USP3-213ENST00000559711 A6NHS1 94 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 TMEM150CB9EJG8 249 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 CLDN4O14493 209 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 OR2B3O76000 313 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 H6PDO95479 791 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 RHCEP18577 417 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 NT5EP21589 574 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 RRM2P31350 389 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 DAPP51397 102 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 CYP27C1Q4G0S4 372 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 TTC23Q5W5X9 447 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 ANKRD34AQ69YU3 496 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 KDM4DQ6B0I6 523 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 KRT80Q6KB66 452 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 GUSBP11Q6P575 273 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 FAHD1Q6P587 224 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 SLC23A3Q6PIS1 610 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 CYP4Z1Q86W10 505 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 ST13P4Q8IZP2 240 aaPredicted RBP11.87□□□□□ -0.51
USP3-213ENST00000559711 ZBTB44Q8NCP5 570 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 SIMC1Q8NDZ2 872 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 OR4C15Q8NGM1 316 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 OR1L3Q8NH93 324 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms