RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 MAPKAPK3Q16644 382 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 SLC25A25Q6KCM7 469 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 OPN5Q6U736 354 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 FAM180AQ6UWF9 173 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 GALNTL5Q7Z4T8 443 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 ZNF227Q86WZ6 799 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 WDR75Q8IWA0 830 aaKnown RBP11.43□□□□□ -0.58
SMAD3-205ENST00000558428 GPALPP1Q8IXQ4 340 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 SLC15A4Q8N697 577 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 SIMC1Q8NDZ2 872 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 PIWIL2Q8TC59 973 aaKnown RBP11.43□□□□□ -0.58
SMAD3-205ENST00000558428 CIDECQ96AQ7 238 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-205ENST00000558428 MIB2Q96AX9 1013 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 ERP27Q96DN0 273 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 MTERF3Q96E29 417 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 SCMH1Q96GD3 660 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 ZNF764Q96H86 408 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-205ENST00000558428 AMDHD1Q96NU7 426 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 ANKRA2Q9H9E1 313 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 ASIC5Q9NY37 505 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 PRODH2Q9UF12 536 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 DTX4Q9Y2E6 619 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 NTNG1Q9Y2I2 539 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 NINQ8N4C6 2090 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 EXPH5Q8NEV8 1989 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 NME2P1O60361 137 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 PLOD3O60568 738 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 SLITRK5O94991 958 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 NADKO95544 446 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-205ENST00000558428 GPX3P22352 226 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 NME2P22392 152 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 MC3RP41968 323 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 FOXK1P85037 733 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 HSPB3Q12988 150 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 TMEM107Q6UX40 140 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 LARP4Q71RC2 724 aaKnown RBP eCLIP11.42□□□□□ -0.58
SMAD3-205ENST00000558428 MDGA2Q7Z553 956 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 LRRC34Q8IZ02 419 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 TAGAPQ8N103 731 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 KRTCAP2Q8N6L1 136 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 BCORP1Q8N888 145 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 ZNF441Q8N8Z8 693 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 FAM98AQ8NCA5 519 aaKnown RBP11.42□□□□□ -0.58
SMAD3-205ENST00000558428 OR7G2Q8NG99 324 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 OR7A2PQ8NGA2 310 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 ZFP28Q8NHY6 868 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 GRHL3Q8TE85 626 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 ADIPOR1Q96A54 375 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 TP53INP1Q96A56 240 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 ZBED6CLQ96FA7 236 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-205ENST00000558428 C7orf26Q96N11 449 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 TAAR6Q96RI8 345 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 ITPAQ9BY32 194 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 TIMMDC1Q9NPL8 285 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 AGPAT4Q9NRZ5 378 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 ATP6V1HQ9UI12 483 aa11.42□□□□□ -0.58
SMAD3-205ENST00000558428 KLF13Q9Y2Y9 288 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-205ENST00000558428 HELZ2Q9BYK8 2649 aaKnown RBP11.42□□□□□ -0.58
SMAD3-205ENST00000558428 RELNP78509 3460 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 A0A087WV62 115 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 GOLGA8QA0A0J9YX86 632 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 GOLGA8OA6NCC3 632 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 GOLGA8NF8WBI6 632 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 EFNA1P20827 205 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-205ENST00000558428 PRPS1L1P21108 318 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 EPHA3P29320 983 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 GPC1P35052 558 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 EMDP50402 254 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 DIO3P55073 304 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 MANFP55145 182 aaKnown RBP11.41□□□□□ -0.58
SMAD3-205ENST00000558428 CLDN8P56748 225 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 NRG3P56975 720 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 PMP22Q01453 160 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 NNATQ16517 81 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 HSP90B2PQ58FF3 399 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 CPTPQ5TA50 214 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 FHL5Q5TD97 284 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 NXNQ6DKJ4 435 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 RTL4Q6ZR62 310 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 ZNF551Q7Z340 670 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-205ENST00000558428 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-205ENST00000558428 ATCAYQ86WG3 371 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 PSD4Q8NDX1 1056 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 C17orf47Q8NEP4 570 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 FAR1Q8WVX9 515 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 CKAP2Q8WWK9 683 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 SPACA9Q96E40 222 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-205ENST00000558428 MAGED4Q96JG8 741 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 PRPF18Q99633 342 aaKnown RBP11.41□□□□□ -0.58
SMAD3-205ENST00000558428 NXF5Q9H1B4 397 aaKnown RBP11.41□□□□□ -0.58
SMAD3-205ENST00000558428 WDR55Q9H6Y2 383 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-205ENST00000558428 SLCO1B3Q9NPD5 702 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 ACSS1Q9NUB1 689 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-205ENST00000558428 RYDENQ9NUL5 291 aaKnown RBP11.41□□□□□ -0.58
SMAD3-205ENST00000558428 ATAD3AQ9NVI7 634 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 DDX18Q9NVP1 670 aaKnown RBP11.41□□□□□ -0.58
SMAD3-205ENST00000558428 VPS4AQ9UN37 437 aa11.41□□□□□ -0.58
SMAD3-205ENST00000558428 PLOD2O00469 737 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 COQ9O75208 318 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 CRYABP02511 175 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms