RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 SMIM29Q86T20 159 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 CDC20BQ86Y33 519 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 MAP7D3Q8IWC1 876 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 CCDC170Q8IYT3 715 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 APCDD1Q8J025 514 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 ZNF557Q8N988 423 aaPredicted RBP5.25□□□□□ -1.57
RTF1-204ENST00000558117 PPP4R1Q8TF05 950 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 SLC38A5Q8WUX1 472 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 ELMOD3Q96FG2 381 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 DPEP2Q9H4A9 486 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 CSNK1G1Q9HCP0 422 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 ARHGEF38Q9NXL2 777 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 STMN3Q9NZ72 180 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 ITGA11Q9UKX5 1188 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 MTMR6Q9Y217 621 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 FARSAQ9Y285 508 aaKnown RBP5.25□□□□□ -1.57
RTF1-204ENST00000558117 MEMO1Q9Y316 297 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 FADS3Q9Y5Q0 445 aa5.25□□□□□ -1.57
RTF1-204ENST00000558117 A0A087WYN8 130 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 A8MZ25 164 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 HHLA1C9JL84 531 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 KPNA3O00505 521 aaPredicted RBP5.24□□□□□ -1.57
RTF1-204ENST00000558117 HS3ST1O14792 307 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 ACADLP28330 430 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 KRT2P35908 639 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 FMO5P49326 533 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 ALDH3A2P51648 485 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 NDST1P52848 882 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 SRP54P61011 504 aaKnown RBP5.24□□□□□ -1.57
RTF1-204ENST00000558117 RPS15P62841 145 aaKnown RBP5.24□□□□□ -1.57
RTF1-204ENST00000558117 AKAP17AQ02040 695 aaKnown RBP5.24□□□□□ -1.57
RTF1-204ENST00000558117 DMPKQ09013 629 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 AP1B1Q10567 949 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 AIMP2Q13155 320 aaKnown RBP5.24□□□□□ -1.57
RTF1-204ENST00000558117 SGCGQ13326 291 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 KIAA0930Q6ICG6 404 aaPredicted RBP5.24□□□□□ -1.57
RTF1-204ENST00000558117 GALNT17Q6IS24 598 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 ALKBH5Q6P6C2 394 aaKnown RBP5.24□□□□□ -1.57
RTF1-204ENST00000558117 RFWD3Q6PCD5 774 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 PAPD4Q6PIY7 484 aaKnown RBP5.24□□□□□ -1.57
RTF1-204ENST00000558117 SARM1Q6SZW1 724 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 C1orf186Q6ZWK4 172 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 USP43Q70EL4 1123 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 TSPAN33Q86UF1 283 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 DCUN1D3Q8IWE4 304 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 UNC45BQ8IWX7 931 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 RASGEF1CQ8N431 466 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 METTL27Q8N6F8 245 aaPredicted RBP5.24□□□□□ -1.57
RTF1-204ENST00000558117 SGMS2Q8NHU3 365 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 CCL4L1Q8NHW4 92 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 THAP6Q8TBB0 222 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 CA5BP1Q8WTZ4 195 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 ZNF653Q96CK0 615 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 SMARCD1Q96GM5 515 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 HPDLQ96IR7 371 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 TCEANC2Q96MN5 208 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 OR2A14Q96R47 310 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 TAAR6Q96RI8 345 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 MAK16Q9BXY0 300 aaKnown RBP5.24□□□□□ -1.57
RTF1-204ENST00000558117 SNX25Q9H3E2 840 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 MAGIXQ9H6Y5 334 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 MBNL1Q9NR56 388 aaKnown RBP5.24□□□□□ -1.57
RTF1-204ENST00000558117 PDRG1Q9NUG6 133 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 LNPEPQ9UIQ6 1025 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 USF3Q68DE3 2245 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 PIKFYVEQ9Y2I7 2098 aa5.24□□□□□ -1.57
RTF1-204ENST00000558117 ARID1AO14497 2285 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 TENM3Q9P273 2699 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 GOLGA6L7A0A1B0GV03 622 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 A0A1W2PS18 150 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 FAM172BPA6NC97 362 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 MYO1GB0I1T2 1018 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 ANKRD63C9JTQ0 380 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 ARHGEF9O43307 516 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 PLPP2O43688 288 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 FGF17O60258 216 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 FMO6PO60774 539 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 SLC19A2O60779 497 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 SPAG6O75602 509 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 SLC22A3O75751 556 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 FGF1P05230 155 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 RALAP11233 206 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 ZNF18P17022 549 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 ANXA7P20073 488 aaKnown RBP5.23□□□□□ -1.57
RTF1-204ENST00000558117 CD86P42081 329 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 MAP3K7CLP57077 242 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 PHEXP78562 749 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 TRIM29Q14134 588 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 ASTE1Q2TB18 679 aaPredicted RBP5.23□□□□□ -1.57
RTF1-204ENST00000558117 ERMARDQ5T6L9 678 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 CNSTQ6PJW8 725 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 IGFL2Q6UWQ7 119 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 ENPP7Q6UWV6 458 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 CFAP77Q6ZQR2 320 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 OR13A1Q8NGR1 328 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 MOSPD2Q8NHP6 518 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 POMGNT1Q8WZA1 660 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 VPS33AQ96AX1 596 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 SLC22A18Q96BI1 424 aa5.23□□□□□ -1.57
RTF1-204ENST00000558117 PDXPQ96GD0 296 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms