RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 ID2Q02363 134 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 ZNF267Q14586 743 aaPredicted RBP11.58□□□□□ -0.56
TPM1-209ENST00000558072 RGNQ15493 299 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 TGIF1Q15583 401 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 ZNF630Q2M218 657 aaPredicted RBP11.58□□□□□ -0.56
TPM1-209ENST00000558072 TBC1D25Q3MII6 688 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 SFT2D3Q587I9 215 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 INTS11Q5TA45 600 aaKnown RBP11.58□□□□□ -0.56
TPM1-209ENST00000558072 HLA-DQA1Q5Y7H0 255 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 DNAJC14Q6Y2X3 702 aaPredicted RBP11.58□□□□□ -0.56
TPM1-209ENST00000558072 RNF111Q6ZNA4 994 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 SHISA6Q6ZSJ9 500 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 SLC29A4Q7RTT9 530 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 ANKRD37Q7Z713 158 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 DTX1Q86Y01 620 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 SLC15A3Q8IY34 581 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 PRSS58Q8IYP2 241 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 FBXW8Q8N3Y1 598 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 OR5L2Q8NGL0 311 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 OR8K3Q8NH51 312 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 ADAMTS15Q8TE58 950 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 NUDT8Q8WV74 236 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 PMM1Q92871 262 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 NKD1Q969G9 470 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 TMEM125Q96AQ2 219 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 STACQ99469 402 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 CPPED1Q9BRF8 314 aaPredicted RBP11.58□□□□□ -0.56
TPM1-209ENST00000558072 TRIM15Q9C019 465 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 KAT8Q9H7Z6 458 aaKnown RBP11.58□□□□□ -0.56
TPM1-209ENST00000558072 GPN2Q9H9Y4 310 aaPredicted RBP11.58□□□□□ -0.56
TPM1-209ENST00000558072 CACYBPQ9HB71 228 aaKnown RBP11.58□□□□□ -0.56
TPM1-209ENST00000558072 SIRT3Q9NTG7 399 aaPredicted RBP11.58□□□□□ -0.56
TPM1-209ENST00000558072 WDR70Q9NW82 654 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 SLC25A37Q9NYZ2 338 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 ZNF639Q9UID6 485 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 MRTO4Q9UKD2 239 aaKnown RBP11.58□□□□□ -0.56
TPM1-209ENST00000558072 PPIEQ9UNP9 301 aaKnown RBP11.58□□□□□ -0.56
TPM1-209ENST00000558072 MSRB2Q9Y3D2 182 aa11.58□□□□□ -0.56
TPM1-209ENST00000558072 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.58□□□□□ -0.56
TPM1-209ENST00000558072 NUP210LQ5VU65 1888 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 UPK1AO00322 258 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 IFNA14P01570 189 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 ALOX5P09917 674 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 BMP2P12643 396 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 HOXB9P17482 250 aaPredicted RBP11.57□□□□□ -0.56
TPM1-209ENST00000558072 HTR1EP28566 365 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 PGDP52209 483 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 EFNA3P52797 238 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 PRKAG1P54619 331 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 TRAP1Q12931 704 aaKnown RBP11.57□□□□□ -0.56
TPM1-209ENST00000558072 CAPRIN1Q14444 709 aaKnown RBP11.57□□□□□ -0.56
TPM1-209ENST00000558072 CYP51A1Q16850 503 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 PRSS53Q2L4Q9 553 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 ZNF750Q32MQ0 723 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 PRAMEF8Q5VWM4 474 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 PRAMEF7Q5VXH5 474 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 CDC73Q6P1J9 531 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 NDUFAF7Q7L592 441 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 LAPTM4BQ86VI4 370 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 PROSER1Q86XN7 944 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 C11orf65Q8NCR3 313 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 C17orf47Q8NEP4 570 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 B3GNT7Q8NFL0 401 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 ADCY4Q8NFM4 1077 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 OR2T12Q8NG77 320 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 OR1N1Q8NGS0 311 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 PTPMT1Q8WUK0 201 aaPredicted RBP11.57□□□□□ -0.56
TPM1-209ENST00000558072 KAT2AQ92830 837 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 TSLPQ969D9 159 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 PPWD1Q96BP3 646 aaKnown RBP11.57□□□□□ -0.56
TPM1-209ENST00000558072 VMP1Q96GC9 406 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 SENP5Q96HI0 755 aaPredicted RBP11.57□□□□□ -0.56
TPM1-209ENST00000558072 NAF1Q96HR8 494 aaKnown RBP11.57□□□□□ -0.56
TPM1-209ENST00000558072 REXO5Q96IC2 774 aaKnown RBP11.57□□□□□ -0.56
TPM1-209ENST00000558072 KCTD14Q9BQ13 255 aaPredicted RBP11.57□□□□□ -0.56
TPM1-209ENST00000558072 MESP1Q9BRJ9 268 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 CNPPD1Q9BV87 410 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 OR10A5Q9H207 317 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 ALG2Q9H553 416 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 TMEM38AQ9H6F2 299 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 TRIM45Q9H8W5 580 aaPredicted RBP11.57□□□□□ -0.56
TPM1-209ENST00000558072 DUSP22Q9NRW4 184 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 SLAMF8Q9P0V8 285 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 P2RX2Q9UBL9 471 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 CLDN16Q9Y5I7 305 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 SCN2AQ99250 2005 aa11.57□□□□□ -0.56
TPM1-209ENST00000558072 PIEZO1Q92508 2521 aa11.56□□□□□ -0.56
TPM1-209ENST00000558072 ELOVL7A1L3X0 281 aa11.56□□□□□ -0.56
TPM1-209ENST00000558072 FAM220BPB1ANY3 271 aa11.56□□□□□ -0.56
TPM1-209ENST00000558072 C5orf58C9J3I9 102 aa11.56□□□□□ -0.56
TPM1-209ENST00000558072 CDK2AP1O14519 115 aa11.56□□□□□ -0.56
TPM1-209ENST00000558072 GSTA4O15217 222 aa11.56□□□□□ -0.56
TPM1-209ENST00000558072 PDE9AO76083 593 aa11.56□□□□□ -0.56
TPM1-209ENST00000558072 PSMG1O95456 288 aa11.56□□□□□ -0.56
TPM1-209ENST00000558072 HMGN2P05204 90 aaKnown RBP11.56□□□□□ -0.56
TPM1-209ENST00000558072 ADRB1P08588 477 aa11.56□□□□□ -0.56
TPM1-209ENST00000558072 CD1EP15812 388 aa11.56□□□□□ -0.56
TPM1-209ENST00000558072 EFNA1P20827 205 aaPredicted RBP11.56□□□□□ -0.56
TPM1-209ENST00000558072 LCN1P31025 176 aa11.56□□□□□ -0.56
TPM1-209ENST00000558072 CLCN2P51788 898 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms