RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 METTL7AQ9H8H3 244 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 PFDN4Q9NQP4 134 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 TRPS1Q9UHF7 1281 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 BCAP29Q9UHQ4 241 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 PSME2Q9UL46 239 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 C15orf41Q9Y2V0 281 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 ANKHD1Q8IWZ3 2542 aaKnown RBP13.41□□□□□ -0.26
SHMT2-235ENST00000557740 PPP6CO00743 305 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 DVL2O14641 736 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 CDH16O75309 829 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 OR4F21O95013 312 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 ESRRBO95718 433 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 KRT6AP02538 564 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 KRT6BP04259 564 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 CSNK2A2P19784 350 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-235ENST00000557740 ECHS1P30084 290 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 CASP3P42574 277 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 KRT6CP48668 564 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 ALDH9A1P49189 494 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 CDK9P50750 372 aaKnown RBP13.4□□□□□ -0.26
SHMT2-235ENST00000557740 CRYZQ08257 329 aaKnown RBP13.4□□□□□ -0.26
SHMT2-235ENST00000557740 PLCXD2Q0VAA5 305 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 EXOSC7Q15024 291 aaKnown RBP13.4□□□□□ -0.26
SHMT2-235ENST00000557740 RASA2Q15283 850 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 SF3B4Q15427 424 aaKnown RBP eCLIP13.4□□□□□ -0.267e-19■■■■□ 22
SHMT2-235ENST00000557740 ACSF3Q4G176 576 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-235ENST00000557740 PM20D2Q8IYS1 436 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 MMP21Q8N119 569 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 C1orf52Q8N6N3 182 aaKnown RBP13.4□□□□□ -0.26
SHMT2-235ENST00000557740 LRRC46Q96FV0 321 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 C1QTNF3Q9BXJ4 246 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 ITPAQ9BY32 194 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 MAT2BQ9NZL9 334 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 CES1P1Q9UKY3 287 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 DTX4Q9Y2E6 619 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 ZNF780BQ9Y6R6 833 aa13.4□□□□□ -0.26
SHMT2-235ENST00000557740 EML6Q6ZMW3 1958 aa13.4□□□□□ -0.27
SHMT2-235ENST00000557740 AHRRA9YTQ3 701 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 MANBAO00462 879 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 GNB5O14775 395 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 ACOX3O15254 700 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 PPM1BO75688 479 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 SUPT7LO94864 414 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 HPNP05981 417 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 ABCB1P08183 1280 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-235ENST00000557740 SBK3P0C264 359 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 HSD3B1P14060 373 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 NAGAP17050 411 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 S1PR1P21453 382 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 BMP5P22003 454 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 HSD3B2P26439 372 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 GCKP35557 465 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 TRA2BP62995 288 aaKnown RBP13.39□□□□□ -0.27
SHMT2-235ENST00000557740 CLCQ05315 142 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 MAP4K2Q12851 820 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 PRICKLE4Q2TBC4 344 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 FAM111BQ6SJ93 734 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 ARSKQ6UWY0 536 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 GPRIN3Q6ZVF9 776 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 LACC1Q8IV20 430 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 CDYL2Q8N8U2 506 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 ADCY4Q8NFM4 1077 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 TM4SF18Q96CE8 201 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 MTBPQ96DY7 904 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 OMA1Q96E52 524 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 HSPBAP1Q96EW2 488 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 TMEM41AQ96HV5 264 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 GNRHR2Q96P88 292 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 ZNF382Q96SR6 550 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 OSBPL11Q9BXB4 747 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 UBQLN3Q9H347 655 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 VPS29Q9UBQ0 182 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 CAMK2AQ9UQM7 478 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 SLC6A5Q9Y345 797 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 L3MBTL1Q9Y468 752 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 C2CD3Q4AC94 2353 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 HIVEP1P15822 2718 aa13.39□□□□□ -0.27
SHMT2-235ENST00000557740 EPPINO95925 133 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 IL2RAP01589 272 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 ABHD2P08910 425 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 HMOX2P30519 316 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 UQCRC1P31930 480 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 HSD17B3P37058 310 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 PEX19P40855 299 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 ASCL1P50553 236 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 DLX5P56178 289 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 RIPPLY3P57055 190 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 CSTF3Q12996 717 aaKnown RBP13.38□□□□□ -0.27
SHMT2-235ENST00000557740 TESK1Q15569 626 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 LTB4RQ15722 352 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 TCHHL1Q5QJ38 904 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-235ENST00000557740 FNDC7Q5VTL7 733 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 ANGPTL8Q6UXH0 198 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 SPNS3Q6ZMD2 512 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 SEM1Q6ZVN7 128 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 OR52R1Q8NGF1 315 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 OR1J4Q8NGS1 313 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 LCORQ96JN0 433 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-235ENST00000557740 TIMP4Q99727 224 aa13.38□□□□□ -0.27
SHMT2-235ENST00000557740 PRDM14Q9GZV8 571 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms