RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 EIF3EP60228 445 aaKnown RBP8.35□□□□□ -1.07
NEDD1-211ENST00000557454 STXBP1P61764 594 aaKnown RBP8.35□□□□□ -1.07
NEDD1-211ENST00000557454 UBA52P62987 128 aaKnown RBP8.35□□□□□ -1.07
NEDD1-211ENST00000557454 HERVK_113P63132 956 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 ERVK-8P63133 956 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 CDH17Q12864 832 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 RBBP5Q15291 538 aaKnown RBP8.35□□□□□ -1.07
NEDD1-211ENST00000557454 TTLL9Q3SXZ7 439 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 CCDC181Q5TID7 509 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 SHQ1Q6PI26 577 aaKnown RBP8.35□□□□□ -1.07
NEDD1-211ENST00000557454 CYHR1Q6ZMK1 362 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 RNF111Q6ZNA4 994 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 Q6ZPA2 131 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 BEND4Q6ZU67 534 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 OR4N5Q8IXE1 308 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 KLHDC8AQ8IYD2 350 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 FBXL14Q8N1E6 418 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 ZDHHC22Q8N966 263 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 WDSUB1Q8N9V3 476 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 MS4A6EQ96DS6 147 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 SNF8Q96H20 258 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 TSNARE1Q96NA8 513 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 DGAT2Q96PD7 388 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 OR4K3Q96R72 315 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 DHRS9Q9BPW9 319 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 ERVK-6Q9BXR3 956 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 SNX15Q9NRS6 342 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.35□□□□□ -1.07
NEDD1-211ENST00000557454 FBXL2Q9UKC9 423 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 NENFQ9UMX5 172 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 USP22Q9UPT9 525 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 EXO1Q9UQ84 846 aaKnown RBP8.35□□□□□ -1.07
NEDD1-211ENST00000557454 ERVK-19Q9WJR5 959 aa8.35□□□□□ -1.07
NEDD1-211ENST00000557454 DYRK3O43781 588 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 SPOPO43791 374 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 FGF17O60258 216 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 ICOSLGO75144 302 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 CDH16O75309 829 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 TNFRSF21O75509 655 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 GAS8O95995 478 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 RHOXF2BP0C7M4 288 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 PCMT1P22061 227 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 IL32P24001 234 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 GRIA1P42261 906 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 SUCLG1P53597 346 aaKnown RBP8.34□□□□□ -1.07
NEDD1-211ENST00000557454 DVL1P1P54792 670 aaPredicted RBP8.34□□□□□ -1.07
NEDD1-211ENST00000557454 CDH15P55291 814 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 CTBP1Q13363 440 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 RCN2Q14257 317 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 CSHL1Q14406 222 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 P2RY6Q15077 328 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 BCL2A1Q16548 175 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 VAX1Q5SQQ9 334 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 PPP4R4Q6NUP7 873 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 LINC00523Q86TU6 105 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 GALNT12Q8IXK2 581 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 SLC35G2Q8TBE7 412 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 SLC5A11Q8WWX8 675 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 HSD17B8Q92506 261 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 CCT6BQ92526 530 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 NEIL2Q969S2 332 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 NODALQ96S42 347 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 FOLH1BQ9HBA9 442 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 KLRF1Q9NZS2 232 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 DKKL1Q9UK85 242 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 POU2F3Q9UKI9 436 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 ADAMTS6Q9UKP5 1117 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 PDE10AQ9Y233 779 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 FKBP7Q9Y680 259 aa8.34□□□□□ -1.07
NEDD1-211ENST00000557454 A0A088AWK7 358 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 C2orf92A0A1B0GVN3 265 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 LOC390937A0A1W2PQ73 354 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 GOLGA8KD6RF30 607 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 GOLGA8TH3BQL2 631 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 GCM2O75603 506 aaPredicted RBP8.33□□□□□ -1.08
NEDD1-211ENST00000557454 PLGP00747 810 aaPredicted RBP8.33□□□□□ -1.08
NEDD1-211ENST00000557454 CLPSP04118 112 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 SERPING1P05155 500 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 F7P08709 466 aaPredicted RBP8.33□□□□□ -1.08
NEDD1-211ENST00000557454 COL6A2P12110 1019 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 FCGR2AP12318 317 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 PEPDP12955 493 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 ZNF10P21506 573 aaPredicted RBP8.33□□□□□ -1.08
NEDD1-211ENST00000557454 COMTP21964 271 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 CNTFP26441 200 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 SLC6A8P48029 635 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 MARCKSL1P49006 195 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 FABP6P51161 128 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 CTBP2P56545 445 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 B3GALT5-AS1P59052 145 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 RPS13P62277 151 aaKnown RBP8.33□□□□□ -1.08
NEDD1-211ENST00000557454 PLIN5Q00G26 463 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 SPOCK1Q08629 439 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 ZNF267Q14586 743 aaPredicted RBP8.33□□□□□ -1.08
NEDD1-211ENST00000557454 ZSWIM7Q19AV6 140 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 SLC30A6Q6NXT4 461 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 B3GLCTQ6Y288 498 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 PPP1R21Q6ZMI0 780 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 TMPRSS11BQ86T26 416 aa8.33□□□□□ -1.08
NEDD1-211ENST00000557454 STK32CQ86UX6 486 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms