RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 NEURL1O76050 574 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 OR6B1O95007 311 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 CBX7O95931 251 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 G6PDP11413 515 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 PLA2G2AP14555 144 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 LBPP18428 481 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 S1PR1P21453 382 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 GPX3P22352 226 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 EPHA3P29320 983 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 MC3RP41968 323 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 DIO3P55073 304 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 HSPB3Q12988 150 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 INPP5JQ15735 1006 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 INAQ16352 499 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 NNATQ16517 81 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 MPEG1Q2M385 716 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 TRMT12Q53H54 448 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 OPN5Q6U736 354 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 FAM180AQ6UWF9 173 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 TMEM107Q6UX40 140 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 LRRC34Q8IZ02 419 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 CISD2Q8N5K1 135 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 KRTCAP2Q8N6L1 136 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 TMEM178AQ8NBL3 297 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 SIMC1Q8NDZ2 872 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 OR7G2Q8NG99 324 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 OR7A2PQ8NGA2 310 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 ZFP28Q8NHY6 868 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 TMEM125Q96AQ2 219 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 ZBED6CLQ96FA7 236 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 MAGEB18Q96M61 343 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 AMDHD1Q96NU7 426 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 ITPAQ9BY32 194 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 GLIPR2Q9H4G4 154 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 WDR55Q9H6Y2 383 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 SLCO1B3Q9NPD5 702 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 MED4Q9NPJ6 270 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 ZNF639Q9UID6 485 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 CFL2Q9Y281 166 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 DTX4Q9Y2E6 619 aa9.8□□□□□ -0.84
HNRNPC-232ENST00000557442 PYCARD-AS1I3L0S3 204 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 NME2P1O60361 137 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 ZNF354AO60765 605 aaPredicted RBP9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 DIAPH2O60879 1101 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 SLITRK5O94991 958 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 SP1P08047 785 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 EFNA1P20827 205 aaPredicted RBP9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 PRPS1L1P21108 318 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 NME2P22392 152 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 GPC1P35052 558 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 SOX18P35713 384 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 NR0B1P51843 470 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 DUSP8Q13202 625 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 MAPKAPK3Q16644 382 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 CPTPQ5TA50 214 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 NXNQ6DKJ4 435 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 OGFOD2Q6N063 350 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 IL20RBQ6UXL0 311 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 FAM47EQ6ZV65 393 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 LARP4Q71RC2 724 aaKnown RBP eCLIP9.79□□□□□ -0.843e-11■■□□□ 11.8
HNRNPC-232ENST00000557442 ZNF551Q7Z340 670 aaPredicted RBP9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 MAVSQ7Z434 540 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 GALNTL5Q7Z4T8 443 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 ZNF227Q86WZ6 799 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 GPALPP1Q8IXQ4 340 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 TAGAPQ8N103 731 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 CKAP2Q8WWK9 683 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 SNRNP40Q96DI7 357 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 ERP27Q96DN0 273 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 SCMH1Q96GD3 660 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 MAGED4Q96JG8 741 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 PRPF18Q99633 342 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 TRIM45Q9H8W5 580 aaPredicted RBP9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 ATAD3AQ9NVI7 634 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 DDX18Q9NVP1 670 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 ASF1BQ9NVP2 202 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 PRODH2Q9UF12 536 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 ATP6V1HQ9UI12 483 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 NTNG1Q9Y2I2 539 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 COPG1Q9Y678 874 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 USH1CQ9Y6N9 552 aa9.79□□□□□ -0.84
HNRNPC-232ENST00000557442 PCNX3Q9H6A9 2034 aa9.78□□□□□ -0.84
HNRNPC-232ENST00000557442 PLOD3O60568 738 aa9.78□□□□□ -0.84
HNRNPC-232ENST00000557442 COQ9O75208 318 aa9.78□□□□□ -0.84
HNRNPC-232ENST00000557442 BCAS2O75934 225 aaPredicted RBP9.78□□□□□ -0.84
HNRNPC-232ENST00000557442 RASAL1O95294 804 aa9.78□□□□□ -0.84
HNRNPC-232ENST00000557442 NADKO95544 446 aaPredicted RBP9.78□□□□□ -0.84
HNRNPC-232ENST00000557442 ALDOCP09972 364 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-232ENST00000557442 LAMP1P11279 417 aa9.78□□□□□ -0.84
HNRNPC-232ENST00000557442 EMDP50402 254 aa9.78□□□□□ -0.84
HNRNPC-232ENST00000557442 MANFP55145 182 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-232ENST00000557442 CLDN8P56748 225 aa9.78□□□□□ -0.84
HNRNPC-232ENST00000557442 NRG3P56975 720 aa9.78□□□□□ -0.84
HNRNPC-232ENST00000557442 PMP22Q01453 160 aa9.78□□□□□ -0.84
HNRNPC-232ENST00000557442 ZNF155Q12901 538 aaPredicted RBP9.78□□□□□ -0.84
HNRNPC-232ENST00000557442 SLC9B1Q4ZJI4 515 aa9.78□□□□□ -0.84
HNRNPC-232ENST00000557442 PIGGQ5H8A4 983 aa9.78□□□□□ -0.84
HNRNPC-232ENST00000557442 FHL5Q5TD97 284 aa9.78□□□□□ -0.84
HNRNPC-232ENST00000557442 SLC25A25Q6KCM7 469 aa9.78□□□□□ -0.84
HNRNPC-232ENST00000557442 RPUSD3Q6P087 351 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms