RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 AWAT2Q6E213 333 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 ENPP7Q6UWV6 458 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 CACUL1Q86Y37 369 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 OR5L1Q8NGL2 311 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 PKP4Q99569 1192 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 EBPLQ9BY08 206 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 AIG1Q9NVV5 245 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 PRDM4Q9UKN5 801 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 RNF150Q9ULK6 438 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 GAPDHSO14556 408 aaPredicted RBP8.47□□□□□ -1.05
SYNE3-205ENST00000557275 MYCLP1P12525 358 aaPredicted RBP8.47□□□□□ -1.05
SYNE3-205ENST00000557275 SNCAP37840 140 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 ZMAT1Q5H9K5 638 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 OCSTAMPQ9BR26 566 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 ISYNA1Q9NPH2 558 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 PCDHA2Q9Y5H9 948 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 LOC102723532A0A0G2JNH3 316 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 TFPTP0C1Z6 253 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 DDCP20711 480 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 PTH2RP49190 550 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 TIGD5Q53EQ6 642 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 TAS2R14Q9NYV8 317 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 EXO1Q9UQ84 846 aaKnown RBP8.47□□□□□ -1.05
SYNE3-205ENST00000557275 UGT2A1Q9Y4X1 527 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 hCG_1809904A0A1W2PP81 198 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 A0A1W2PPE2 198 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 A0A1W2PR64 198 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 A0A1W2PRV1 198 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 CDKN2BP42772 138 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 SPHARQ15513 63 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 CATSPEREQ5SY80 951 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 KIAA1211LQ6NV74 962 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 SLC35F3Q8IY50 421 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF417Q8TAU3 575 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 ACP6Q9NPH0 428 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 C2orf42Q9NWW7 574 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 VSTM2BA6NLU5 285 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 EPHB6O15197 1021 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 MMP20O60882 483 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 GPR37L1O60883 481 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 SLITRK3O94933 977 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 CRYBB1P53674 252 aaPredicted RBP8.47□□□□□ -1.05
SYNE3-205ENST00000557275 CMPK2Q5EBM0 449 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 HACD2Q6Y1H2 254 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 TEX26Q8N6G2 289 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 C16orf78Q8WTQ4 265 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 ASB13Q8WXK3 278 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 NMUR1Q9HB89 426 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 HMX1Q9NP08 348 aaPredicted RBP8.47□□□□□ -1.05
SYNE3-205ENST00000557275 SLAMF7Q9NQ25 335 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 TBX10O75333 385 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 MMP2P08253 660 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 GKP32189 559 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 VIPR1P32241 457 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 LSSP48449 732 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 OC90Q02509 493 aaPredicted RBP8.47□□□□□ -1.05
SYNE3-205ENST00000557275 ACSBG2Q5FVE4 666 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF461Q8TAF7 563 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 CHRDL1Q9BU40 450 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 DOHHQ9BU89 302 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 TP63Q9H3D4 680 aaPredicted RBP8.47□□□□□ -1.05
SYNE3-205ENST00000557275 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.47□□□□□ -1.05
SYNE3-205ENST00000557275 MROH6A6NGR9 719 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 RAB5AP20339 215 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 UBE2KP61086 200 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 CNTN2Q02246 1040 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 CEACAM19Q7Z692 300 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 MRPL10Q7Z7H8 261 aaKnown RBP8.47□□□□□ -1.05
SYNE3-205ENST00000557275 LGALS12Q96DT0 336 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 WNT9AO14904 365 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 PMM2O15305 246 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 TMEM63AO94886 807 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 PROS1P07225 676 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 SLC2A1P11166 492 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 GRM5P41594 1212 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 PRDM9Q9NQV7 894 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 ABCA4P78363 2273 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 RPS10-NUDT3A0A1W2PQS6 291 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 XKRY2A2RUG3 117 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 TRAPPC6AO75865 159 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 RPS10P46783 165 aaKnown RBP8.46□□□□□ -1.05
SYNE3-205ENST00000557275 MFGE8Q08431 387 aaPredicted RBP8.46□□□□□ -1.05
SYNE3-205ENST00000557275 RNF151Q2KHN1 245 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF585AQ6P3V2 769 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 THOC6Q86W42 341 aaKnown RBP8.46□□□□□ -1.05
SYNE3-205ENST00000557275 LRRC28Q86X40 367 aaPredicted RBP8.46□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF321PQ8N8H1 164 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 TMEM185AQ8NFB2 350 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 OR14C36Q8NHC7 312 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 CANT1Q8WVQ1 401 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 LRFN5Q96NI6 719 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 INPP4AQ96PE3 977 aaPredicted RBP8.46□□□□□ -1.05
SYNE3-205ENST00000557275 TRIB3Q96RU7 358 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 INPP5EQ9NRR6 644 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 CD300LBA8K4G0 201 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 ITM2AO43736 263 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 APBB3O95704 486 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 EMX2Q04743 252 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 GBX1Q14549 363 aa8.46□□□□□ -1.05
SYNE3-205ENST00000557275 LPCAT3Q6P1A2 487 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms