RNA–Protein interactions for RNA: ENST00000557150.5

APEX1-215, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, human

TSL 3

Gene APEX1, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APEX1-215	ENST00000557150	PELO	Q9BRX2	385 aa	Known RBP	11.44	□□□□□ -0.58
APEX1-215	ENST00000557150	SPATA5L1	Q9BVQ7	753 aa		11.44	□□□□□ -0.58
APEX1-215	ENST00000557150	BTBD2	Q9BX70	525 aa		11.44	□□□□□ -0.58
APEX1-215	ENST00000557150	OSBPL10	Q9BXB5	764 aa		11.44	□□□□□ -0.58
APEX1-215	ENST00000557150	PRTFDC1	Q9NRG1	225 aa		11.44	□□□□□ -0.58
APEX1-215	ENST00000557150	THSD1	Q9NS62	852 aa		11.44	□□□□□ -0.58
APEX1-215	ENST00000557150	EXD2	Q9NVH0	621 aa		11.44	□□□□□ -0.58
APEX1-215	ENST00000557150	GIN1	Q9NXP7	522 aa		11.44	□□□□□ -0.58
APEX1-215	ENST00000557150	USE1	Q9NZ43	259 aa		11.44	□□□□□ -0.58
APEX1-215	ENST00000557150	MAT2B	Q9NZL9	334 aa		11.44	□□□□□ -0.58
APEX1-215	ENST00000557150	IFT80	Q9P2H3	777 aa	Predicted RBP	11.44	□□□□□ -0.58
APEX1-215	ENST00000557150	GMEB2	Q9UKD1	530 aa		11.44	□□□□□ -0.58
APEX1-215	ENST00000557150	ABCG2	Q9UNQ0	655 aa		11.44	□□□□□ -0.58
APEX1-215	ENST00000557150	PCDHGB2	Q9Y5G2	931 aa		11.44	□□□□□ -0.58
APEX1-215	ENST00000557150	GPC6	Q9Y625	555 aa	Predicted RBP	11.44	□□□□□ -0.58
APEX1-215	ENST00000557150	AK5	Q9Y6K8	562 aa		11.44	□□□□□ -0.58
APEX1-215	ENST00000557150	GOLGA4	Q13439	2230 aa	Known RBP	11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	ADAMTS9	Q9P2N4	1935 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150		A0A1W2PQM1	296 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	hCG_2039718	K7EN88	272 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	DSCR3	O14972	297 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	KHNYN	O15037	678 aa	Known RBP	11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	ZNF749	O43361	778 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	OR10H2	O60403	315 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	E2F6	O75461	281 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	MFN2	O95140	757 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	ETS2	P15036	469 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	CD247	P20963	164 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	DNAJA1	P31689	397 aa	Known RBP	11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	GALNS	P34059	522 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	ALDH3A2	P51648	485 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	ARHGDIA	P52565	204 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	MRPS35	P82673	323 aa	Known RBP	11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	DAB2	P98082	770 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	KCNC4	Q03721	635 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	STX4	Q12846	297 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	SERTAD2	Q14140	314 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	TRMT12	Q53H54	448 aa	Known RBP	11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	NHSL2	Q5HYW2	709 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	EXOSC6	Q5RKV6	272 aa	Known RBP	11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	HEPHL1	Q6MZM0	1159 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	SHQ1	Q6PI26	577 aa	Known RBP	11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	FAM111B	Q6SJ93	734 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	TTLL10	Q6ZVT0	673 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	STK32C	Q86UX6	486 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	OR2I1P	Q8NGU4	316 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	OR51Q1	Q8NH59	317 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	IFI44	Q8TCB0	444 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	TRNT1	Q96Q11	434 aa	Known RBP	11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	OR1F2P	Q96R84	312 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	TREX2	Q9BQ50	279 aa	Predicted RBP	11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	YIPF4	Q9BSR8	244 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	NDC1	Q9BTX1	674 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	GTPBP2	Q9BX10	602 aa	Known RBP	11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	GABARAPL1	Q9H0R8	117 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	FGF21	Q9NSA1	209 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	SMPD3	Q9NY59	655 aa	Predicted RBP	11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	MMACHC	Q9Y4U1	282 aa		11.43	□□□□□ -0.58
APEX1-215	ENST00000557150	PI4KA	P42356	2102 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	DLGAP1	O14490	977 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	COQ9	O75208	318 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	FPR1	P21462	350 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	STT3A	P46977	705 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	KCNJ5	P48544	419 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	NUBP1	P53384	320 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	MAT1A	Q00266	395 aa	Known RBP	11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	FUT5	Q11128	374 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	EPS8	Q12929	822 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	SLC13A2	Q13183	592 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	DSG2	Q14126	1118 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	GK3P	Q14409	553 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	C6orf52	Q5T4I8	152 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	TBPL2	Q6SJ96	375 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	TMPRSS9	Q7Z410	1059 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	SHISA5	Q8N114	240 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	CDRT4	Q8N9R6	151 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	MAGEE2	Q8TD90	523 aa	Predicted RBP	11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	PROX1	Q92786	737 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	GATA6	Q92908	595 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	SLC35A4	Q96G79	324 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	ZNF578	Q96N58	590 aa	Predicted RBP	11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	COL21A1	Q96P44	957 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	ZNF300	Q96RE9	604 aa	Predicted RBP	11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	STAC	Q99469	402 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	EPYC	Q99645	322 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	RBM4B	Q9BQ04	359 aa	Known RBP	11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	RBM4	Q9BWF3	364 aa	Known RBP	11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	ALOXE3	Q9BYJ1	711 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	ARRDC1-AS1	Q9H2J1	176 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	PIGU	Q9H490	435 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	REEP1	Q9H902	201 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	EQTN	Q9NQ60	294 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	NDUFAF4	Q9P032	175 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	SEC14L3	Q9UDX4	400 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	SRPK3	Q9UPE1	567 aa		11.42	□□□□□ -0.58
APEX1-215	ENST00000557150	TMEM184B	Q9Y519	407 aa	Predicted RBP	11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms