RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 C22orf46C9J442 243 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 UPK3BL2E5RIL1 263 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 ARNTLO00327 626 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 SOCS6O14544 535 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 EIF1BO60739 113 aaKnown RBP4.84□□□□□ -1.64
TMEM260-210ENST00000556422 LY86O95711 162 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 FGF19O95750 216 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 SOD1P00441 154 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 NCK1P16333 377 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 VIPR1P32241 457 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 MMP12P39900 470 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 EIF1P41567 113 aaKnown RBP4.84□□□□□ -1.64
TMEM260-210ENST00000556422 CHN2P52757 468 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 BNIP2Q12982 314 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 TARDBPQ13148 414 aaKnown RBP eCLIP4.84□□□□□ -1.64
TMEM260-210ENST00000556422 PPIGQ13427 754 aaKnown RBP eCLIP4.84□□□□□ -1.64
TMEM260-210ENST00000556422 KRR1Q13601 381 aaKnown RBP4.84□□□□□ -1.64
TMEM260-210ENST00000556422 BOP1Q14137 746 aaKnown RBP4.84□□□□□ -1.64
TMEM260-210ENST00000556422 FGL2Q14314 439 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 TTLL9Q3SXZ7 439 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 POM121L1PQ3SYA9 428 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 ZNF658BQ4V348 819 aaPredicted RBP4.84□□□□□ -1.64
TMEM260-210ENST00000556422 FAM98BQ52LJ0 330 aaKnown RBP4.84□□□□□ -1.64
TMEM260-210ENST00000556422 ARHGAP15Q53QZ3 475 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.84□□□□□ -1.64
TMEM260-210ENST00000556422 FAM109BQ6ICB4 259 aaPredicted RBP4.84□□□□□ -1.64
TMEM260-210ENST00000556422 TYW3Q6IPR3 259 aaKnown RBP4.84□□□□□ -1.64
TMEM260-210ENST00000556422 SPESP1Q6UW49 350 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 ADGRD2Q7Z7M1 963 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 MSRB3Q8IXL7 192 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 ETFBKMTQ8IXQ9 262 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 C19orf18Q8NEA5 215 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 ZFP28Q8NHY6 868 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 ULK4Q96C45 1275 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 LMF1Q96S06 567 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 ELF4Q99607 663 aaPredicted RBP4.84□□□□□ -1.64
TMEM260-210ENST00000556422 CITED2Q99967 270 aaPredicted RBP4.84□□□□□ -1.64
TMEM260-210ENST00000556422 METTL9Q9H1A3 318 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 SLC32A1Q9H598 525 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 SLA2Q9H6Q3 261 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 SLC6A13Q9NSD5 602 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 ARL15Q9NXU5 204 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 SLC25A37Q9NYZ2 338 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 ACTR10Q9NZ32 417 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 VAPAQ9P0L0 249 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 EIF3KQ9UBQ5 218 aaKnown RBP4.84□□□□□ -1.64
TMEM260-210ENST00000556422 MIOXQ9UGB7 285 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 MGAT4AQ9UM21 535 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 STARD10Q9Y365 291 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 MYOCOSA0A1B0GUC4 107 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 DHRS12A0PJE2 317 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 OR2AG2A6NM03 316 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 MANBAO00462 879 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 SOCS2O14508 198 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 PGRMC2O15173 223 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 CASC3O15234 703 aaKnown RBP4.83□□□□□ -1.64
TMEM260-210ENST00000556422 DEAF1O75398 565 aaPredicted RBP4.83□□□□□ -1.64
TMEM260-210ENST00000556422 PDYNP01213 254 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 KLK3P07288 261 aaPredicted RBP4.83□□□□□ -1.64
TMEM260-210ENST00000556422 ANXA5P08758 320 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 HNRNPA1P09651 372 aaKnown RBP eCLIP4.83□□□□□ -1.64
TMEM260-210ENST00000556422 OR56A5P0C7T3 313 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 RD3LP0DJH9 198 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 HOXB9P17482 250 aaPredicted RBP4.83□□□□□ -1.64
TMEM260-210ENST00000556422 PSMC3P17980 439 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 CD22P20273 847 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 CTSCP53634 463 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 UGT2B15P54855 530 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 OR4D2P58180 307 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 MTPNP58546 118 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 POLR2LP62875 67 aaKnown RBP4.83□□□□□ -1.64
TMEM260-210ENST00000556422 EIF2S3LQ2VIR3 472 aaKnown RBP4.83□□□□□ -1.64
TMEM260-210ENST00000556422 PTCHD3Q3KNS1 767 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 GGTA1PQ4G0N0 100 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 LYPD8Q6UX82 237 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 SLC16A12Q6ZSM3 486 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 TRILQ7L0X0 811 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 PARS2Q7L3T8 475 aaKnown RBP4.83□□□□□ -1.64
TMEM260-210ENST00000556422 KLBQ86Z14 1044 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 CCDC103Q8IW40 242 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 FAM185AQ8N0U4 392 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 C10orf111Q8N326 155 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 KRTCAP2Q8N6L1 136 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 SETD9Q8NE22 299 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 OR10H4Q8NGA5 316 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 SLC13A3Q8WWT9 602 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 GTF2H4Q92759 462 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 RIT1Q92963 219 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 OTUB2Q96DC9 234 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 HHIPQ96QV1 700 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 RIOK2Q9BVS4 552 aaKnown RBP4.83□□□□□ -1.64
TMEM260-210ENST00000556422 FAM83DQ9H4H8 585 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 OPA3Q9H6K4 179 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 ZFP14Q9HCL3 533 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 BIN3Q9NQY0 253 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 ASIC5Q9NY37 505 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 NCDNQ9UBB6 729 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 IL36AQ9UHA7 158 aa4.83□□□□□ -1.64
TMEM260-210ENST00000556422 ZNF490Q9ULM2 529 aaPredicted RBP4.83□□□□□ -1.64
TMEM260-210ENST00000556422 TRBV5-3A0A0A0MS03 114 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms