RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 RPS5P46782 204 aaKnown RBP14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 DEFA5Q01523 94 aa14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 SNTB2Q13425 540 aaKnown RBP14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 CTF1Q16619 201 aa14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 SOWAHCQ53LP3 525 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 KRT77Q7Z794 578 aa14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 L3MBTL4Q8NA19 623 aa14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 NUP43Q8NFH3 380 aa14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 XKR8Q9H6D3 395 aa14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 SLC31A1O15431 190 aa14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 ZNF8P17098 575 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 NDUFV2P19404 249 aa14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 ALAS2P22557 587 aa14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 CTSOP43234 321 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 NOGQ13253 232 aa14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 RPTNQ6XPR3 784 aa14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 RNF31Q96EP0 1072 aa14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 SNX18Q96RF0 628 aa14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 SLC6A16Q9GZN6 736 aa14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 CNIH4Q9P003 139 aa14.28□□□□□ -0.12
ARHGEF40-207ENST00000556399 PRODHO43272 600 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 HPGDSO60760 199 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 CFL1P23528 166 aaKnown RBP14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 MAGEA2P43356 314 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 SLAMF1Q13291 335 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 TRAM1Q15629 374 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 MEX3DQ86XN8 651 aaKnown RBP14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 ZNF248Q8NDW4 579 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 C14orf105Q9NVL8 296 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 TMEM88BA6NKF7 163 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 TACSTD2P09758 323 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 OR12D2P58182 307 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 SF3A2Q15428 464 aaKnown RBP14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 SYNPOQ8N3V7 929 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 YIPF7Q8N8F6 280 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 YIPF6Q96EC8 236 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 S100A16Q96FQ6 103 aaKnown RBP14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 MS4A4AQ96JQ5 239 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 ZNF354BQ96LW1 612 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 ZSWIM3Q96MP5 696 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 S100A13Q99584 98 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 TM9SF2Q99805 663 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 MYNNQ9NPC7 610 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 NDUFAF4Q9P032 175 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 MAU2Q9Y6X3 613 aa14.27□□□□□ -0.12
ARHGEF40-207ENST00000556399 LOC102723532A0A0G2JNH3 316 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 TRBV4-1A0A0J9YWV2 114 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 UNC119BA6NIH7 251 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 CPA6Q8N4T0 437 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 SYT14Q8NB59 555 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 OR52P1PQ8NH57 321 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 DNAJA4Q8WW22 397 aaPredicted RBP14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 GON7Q9BXV9 100 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 WWP2O00308 870 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 RASGRP1O95267 797 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 SCG5P05408 212 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 CYBAP13498 195 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 FGFBP1Q14512 234 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 FAM214AQ32MH5 1076 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 PLCZ1Q86YW0 608 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 GPALPP1Q8IXQ4 340 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 CHST4Q8NCG5 386 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 RHNO1Q9BSD3 238 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 LIPT1Q9Y234 373 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 TMEM5Q9Y2B1 443 aa14.27□□□□□ -0.13
ARHGEF40-207ENST00000556399 KMOO15229 486 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 EMC8O43402 210 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 GNSP15586 552 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 HDDC3Q8N4P3 179 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 OR51A7Q8NH64 312 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 GABARAPL1Q9H0R8 117 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 SLC35C2Q9NQQ7 365 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 RGS17Q9UGC6 210 aaPredicted RBP14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 TEX13CA0A0J9YWL9 993 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 EDDM13A0A1B0GTR0 161 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 APODP05090 189 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 SLC6A6P31641 620 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 RAB40BQ12829 278 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 NKG7Q16617 165 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 PLBD1Q6P4A8 553 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 TAS1R1Q7RTX1 841 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 HSD11B1LQ7Z5J1 315 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 C15orf40Q8WUR7 153 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 SPHK2Q9NRA0 654 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 HCN3Q9P1Z3 774 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 PCDHGA3Q9Y5H0 932 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 HEBP2Q9Y5Z4 205 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 ARAFP10398 606 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 BMP1P13497 986 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 IL1RNP18510 177 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 TAS2R38P59533 333 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 PUDPQ08623 228 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 OR2G6Q5TZ20 316 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 NRMQ8IXM6 262 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 SLC44A3Q8N4M1 653 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 SIMC1Q8NDZ2 872 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 FCER2P06734 321 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 PRR35P0CG20 571 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 DRD2P14416 443 aa14.26□□□□□ -0.13
ARHGEF40-207ENST00000556399 DDCP20711 480 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms