RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 OR52N2Q8NGI0 321 aa10.3□□□□□ -0.76
TMEM260-208ENST00000555905 PNPT1Q8TCS8 783 aaKnown RBP10.3□□□□□ -0.76
TMEM260-208ENST00000555905 PTPMT1Q8WUK0 201 aaPredicted RBP10.3□□□□□ -0.76
TMEM260-208ENST00000555905 KIAA1143Q96AT1 154 aaPredicted RBP10.3□□□□□ -0.76
TMEM260-208ENST00000555905 SLC35G5Q96KT7 338 aa10.3□□□□□ -0.76
TMEM260-208ENST00000555905 ART5Q96L15 291 aa10.3□□□□□ -0.76
TMEM260-208ENST00000555905 MS4A4EQ96PG1 132 aa10.3□□□□□ -0.76
TMEM260-208ENST00000555905 RAB3IPQ96QF0 476 aaPredicted RBP10.3□□□□□ -0.76
TMEM260-208ENST00000555905 CNPPD1Q9BV87 410 aa10.3□□□□□ -0.76
TMEM260-208ENST00000555905 CADM1Q9BY67 442 aaKnown RBP10.3□□□□□ -0.76
TMEM260-208ENST00000555905 TRIM8Q9BZR9 551 aa10.3□□□□□ -0.76
TMEM260-208ENST00000555905 CMTM6Q9NX76 183 aa10.3□□□□□ -0.76
TMEM260-208ENST00000555905 NTMQ9P121 344 aa10.3□□□□□ -0.76
TMEM260-208ENST00000555905 TMEM181Q9P2C4 612 aa10.3□□□□□ -0.76
TMEM260-208ENST00000555905 ABCD2Q9UBJ2 740 aa10.3□□□□□ -0.76
TMEM260-208ENST00000555905 KCND3Q9UK17 655 aa10.3□□□□□ -0.76
TMEM260-208ENST00000555905 KLK13Q9UKR3 277 aa10.3□□□□□ -0.76
TMEM260-208ENST00000555905 TCFL5Q9UL49 500 aa10.3□□□□□ -0.76
TMEM260-208ENST00000555905 FAF1Q9UNN5 650 aaPredicted RBP10.3□□□□□ -0.76
TMEM260-208ENST00000555905 C19orf53Q9UNZ5 99 aaPredicted RBP10.3□□□□□ -0.76
TMEM260-208ENST00000555905 NEUROG3Q9Y4Z2 214 aa10.3□□□□□ -0.76
TMEM260-208ENST00000555905 GMEB1Q9Y692 573 aa10.3□□□□□ -0.76
TMEM260-208ENST00000555905 UPK1AO00322 258 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 NME4O00746 187 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 PRAMEF2O60811 474 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 UMODP07911 640 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 CT62P0C5K7 136 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 LIPCP11150 499 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 MMP11P24347 488 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 CRATP43155 626 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 ID4P47928 161 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 KHKP50053 298 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 EEFSECP57772 596 aaKnown RBP10.29□□□□□ -0.76
TMEM260-208ENST00000555905 TXNL4AP83876 142 aaKnown RBP10.29□□□□□ -0.76
TMEM260-208ENST00000555905 FADDQ13158 208 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 SELPLGQ14242 412 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 SSPNQ14714 243 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 RGNQ15493 299 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 CYP51A1Q16850 503 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 TRMT12Q53H54 448 aaKnown RBP10.29□□□□□ -0.76
TMEM260-208ENST00000555905 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.29□□□□□ -0.76
TMEM260-208ENST00000555905 FHL5Q5TD97 284 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 THSD4Q6ZMP0 1018 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 RNF130Q86XS8 419 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 DTX1Q86Y01 620 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 MORN4Q8NDC4 146 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 TNIP2Q8NFZ5 429 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 OR52R1Q8NGF1 315 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 SLC2A12Q8TD20 617 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 DOK4Q8TEW6 326 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 NKD1Q969G9 470 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 CTHRC1Q96CG8 243 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 FBXL20Q96IG2 436 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 VPS50Q96JG6 964 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 LPAR4Q99677 370 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 KCTD14Q9BQ13 255 aaPredicted RBP10.29□□□□□ -0.76
TMEM260-208ENST00000555905 SCNM1Q9BWG6 230 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 SPATA9Q9BWV2 254 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 OR8D2Q9GZM6 311 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 IKZF5Q9H5V7 419 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 EPS8L2Q9H6S3 715 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 KAT8Q9H7Z6 458 aaKnown RBP10.29□□□□□ -0.76
TMEM260-208ENST00000555905 ANKRA2Q9H9E1 313 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 GPN2Q9H9Y4 310 aaPredicted RBP10.29□□□□□ -0.76
TMEM260-208ENST00000555905 EQTNQ9NQ60 294 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 COPS7AQ9UBW8 275 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 BCAP29Q9UHQ4 241 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 ZNF639Q9UID6 485 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 ERVK-19Q9WJR5 959 aa10.29□□□□□ -0.76
TMEM260-208ENST00000555905 LOC101059948A0A1B0GTJ6 334 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 CFAP73A6NFT4 308 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 SAGE2PA6NJ88 616 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 PDE5AO76074 875 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 CBX7O95931 251 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 HMGN2P05204 90 aaKnown RBP10.28□□□□□ -0.76
TMEM260-208ENST00000555905 HSD17B1P14061 328 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 GPX2P18283 190 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 S1PR1P21453 382 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 MATN1P21941 496 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 PRIM2P49643 509 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 RPS18P62269 152 aaKnown RBP10.28□□□□□ -0.76
TMEM260-208ENST00000555905 RPS26P62854 115 aaKnown RBP10.28□□□□□ -0.76
TMEM260-208ENST00000555905 LIPEQ05469 1076 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 FUT7Q11130 342 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 LASP1Q14847 261 aaKnown RBP10.28□□□□□ -0.76
TMEM260-208ENST00000555905 EXOSC7Q15024 291 aaKnown RBP10.28□□□□□ -0.76
TMEM260-208ENST00000555905 TBC1D25Q3MII6 688 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 PIGGQ5H8A4 983 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 FAM69BQ5VUD6 431 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 ZCCHC12Q6PEW1 402 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 RNF111Q6ZNA4 994 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 SERPINA11Q86U17 422 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 ULK2Q8IYT8 1036 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 FBXW8Q8N3Y1 598 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 OR10A6Q8NH74 314 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 JADE3Q92613 823 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 NACC2Q96BF6 587 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 SENP5Q96HI0 755 aaPredicted RBP10.28□□□□□ -0.76
TMEM260-208ENST00000555905 EFHD1Q9BUP0 239 aa10.28□□□□□ -0.76
TMEM260-208ENST00000555905 ACTRT3Q9BYD9 372 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms