RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 ZNF382Q96SR6 550 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 FAIM2Q9BWQ8 316 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 SHCBP1LQ9BZQ2 653 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 PRDM14Q9GZV8 571 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 ZNF225Q9UK10 706 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 STK38LQ9Y2H1 464 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 C15orf41Q9Y2V0 281 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 A0A1B0GTL3 188 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 EXOC1LA0A1B0GW35 172 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 POC1B-GALNT4F8VUJ3 575 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 PPM1BO75688 479 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 EPPINO95925 133 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 PDYNP01213 254 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 KRT6AP02538 564 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 KRT6BP04259 564 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 ABCB1P08183 1280 aaPredicted RBP11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 TAC1P20366 129 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 NT5EP21589 574 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 CEACAM8P31997 349 aaPredicted RBP11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 HSD17B3P37058 310 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 GSTM5P46439 218 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 KRT6CP48668 564 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 CDK9P50750 372 aaKnown RBP11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 CLCQ05315 142 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 CRYZQ08257 329 aaKnown RBP11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 MGAT2Q10469 447 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 DUSP8Q13202 625 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 FBXL19-AS1Q494R0 122 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 ZNF678Q5SXM1 525 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 FNDC7Q5VTL7 733 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 TRMT10CQ7L0Y3 403 aaKnown RBP11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 LACC1Q8IV20 430 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 SAMD14Q8IZD0 417 aaPredicted RBP11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 GBP7Q8N8V2 638 aaPredicted RBP11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 DOK4Q8TEW6 326 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 TM4SF18Q96CE8 201 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 JSRP1Q96MG2 331 aaPredicted RBP11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 ZNF681Q96N22 645 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 ZNF559Q9BR84 538 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 NXF5Q9H1B4 397 aaKnown RBP11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 SLC6A15Q9H2J7 730 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 FARSBQ9NSD9 589 aaKnown RBP11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 MAT2BQ9NZL9 334 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 VPS29Q9UBQ0 182 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 ZNF629Q9UEG4 869 aaPredicted RBP11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 MCM8Q9UJA3 840 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 L3MBTL1Q9Y468 752 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 HCFC1P51610 2035 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 HIVEP1P15822 2718 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 CCDC168Q8NDH2 2452 aa11.63□□□□□ -0.55
HNRNPC-221ENST00000555883 ANKRD17O75179 2603 aaKnown RBP11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 SERTM1A2A2V5 107 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 KIF2AO00139 706 aaPredicted RBP11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 SYT5O00445 386 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 PPP6CO00743 305 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 TO15178 435 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 BCAS2O75934 225 aaPredicted RBP11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 DRD2P14416 443 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 KRT15P19012 456 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 DRD5P21918 477 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 GCAP28676 217 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 DEKP35659 375 aaKnown RBP11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 SOX18P35713 384 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 CDH13P55290 713 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 ACSF3Q4G176 576 aaPredicted RBP11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 TIGD3Q6B0B8 471 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 VASNQ6EMK4 673 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 SLC30A6Q6NXT4 461 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 GALNT18Q6P9A2 607 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 SEM1Q6ZVN7 128 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 NUP54Q7Z3B4 507 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 LIX1LQ8IVB5 337 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 SLC22A9Q8IVM8 553 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 ZNF675Q8TD23 568 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 ACMSDQ8TDX5 336 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 LCORQ96JN0 433 aaPredicted RBP11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 TIMP4Q99727 224 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 PRODH2Q9UF12 536 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 FOXD3Q9UJU5 478 aaPredicted RBP11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 ZNF780BQ9Y6R6 833 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 DNAJC13O75165 2243 aa11.62□□□□□ -0.55
HNRNPC-221ENST00000555883 TEP1Q99973 2627 aaKnown RBP11.61□□□□□ -0.55
HNRNPC-221ENST00000555883 C15orf38-AP3S2A0A0A6YYH1 394 aa11.61□□□□□ -0.55
HNRNPC-221ENST00000555883 CCDC151A5D8V7 595 aa11.61□□□□□ -0.55
HNRNPC-221ENST00000555883 FRG2CA6NGY1 282 aa11.61□□□□□ -0.55
HNRNPC-221ENST00000555883 CD8B2A6NJW9 211 aa11.61□□□□□ -0.55
HNRNPC-221ENST00000555883 MANBAO00462 879 aa11.61□□□□□ -0.55
HNRNPC-221ENST00000555883 DVL2O14641 736 aa11.61□□□□□ -0.55
HNRNPC-221ENST00000555883 ULK1O75385 1050 aa11.61□□□□□ -0.55
HNRNPC-221ENST00000555883 ERAL1O75616 437 aaKnown RBP11.61□□□□□ -0.55
HNRNPC-221ENST00000555883 SUPT7LO94864 414 aa11.61□□□□□ -0.55
HNRNPC-221ENST00000555883 OR4F21O95013 312 aa11.61□□□□□ -0.55
HNRNPC-221ENST00000555883 CBX7O95931 251 aa11.61□□□□□ -0.55
HNRNPC-221ENST00000555883 GSTA1P08263 222 aa11.61□□□□□ -0.55
HNRNPC-221ENST00000555883 IMPDH1P20839 514 aa11.61□□□□□ -0.55
HNRNPC-221ENST00000555883 ATP5F1P24539 256 aaPredicted RBP11.61□□□□□ -0.55
HNRNPC-221ENST00000555883 PTPN6P29350 595 aa11.61□□□□□ -0.55
HNRNPC-221ENST00000555883 PPICP45877 212 aa11.61□□□□□ -0.55
HNRNPC-221ENST00000555883 MASP1P48740 699 aa11.61□□□□□ -0.55
HNRNPC-221ENST00000555883 TRPC1P48995 793 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms