RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 CNOT11Q9UKZ1 510 aaKnown RBP9.92□□□□□ -0.82
TDP1-212ENST00000555565 TMCO1Q9UM00 188 aa9.92□□□□□ -0.82
TDP1-212ENST00000555565 CUBNO60494 3623 aa9.92□□□□□ -0.82
TDP1-212ENST00000555565 TLN2Q9Y4G6 2542 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 MPDZO75970 2070 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 C2orf92A0A1B0GVN3 265 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 A0A1W2PPR1 153 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 TRIM49D1C9J1S8 452 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 POC1B-GALNT4F8VUJ3 575 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 HCN1O60741 890 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 SMIM24O75264 130 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 LRATO95237 230 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 RPS17P08708 135 aaKnown RBP9.91□□□□□ -0.82
TDP1-212ENST00000555565 TSPAN8P19075 237 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 CD53P19397 219 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 PIK3R1P27986 724 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 XKP51811 444 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 NKX6-1P78426 367 aaPredicted RBP9.91□□□□□ -0.82
TDP1-212ENST00000555565 FUT7Q11130 342 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 TBL3Q12788 808 aaKnown RBP9.91□□□□□ -0.82
TDP1-212ENST00000555565 IFT88Q13099 833 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 KEAP1Q14145 624 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 GGTA1PQ4G0N0 100 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 FLYWCH1Q4VC44 716 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 SGO1Q5FBB7 561 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 C10orf62Q5T681 223 aaPredicted RBP9.91□□□□□ -0.82
TDP1-212ENST00000555565 FAM219BQ5XKK7 198 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 LETMD1Q6P1Q0 360 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 POMZP3Q6PJE2 187 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 SEM1Q6ZVN7 128 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 COMMD6Q7Z4G1 85 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 MILR1Q7Z6M3 343 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 CXorf67Q86X51 503 aaPredicted RBP9.91□□□□□ -0.82
TDP1-212ENST00000555565 GALNT12Q8IXK2 581 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 METTL4Q8N3J2 472 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 ZNF615Q8N8J6 731 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 RELL2Q8NC24 303 aaPredicted RBP9.91□□□□□ -0.82
TDP1-212ENST00000555565 OR4F6Q8NGB9 312 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 OR4K14Q8NGD5 310 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 FAM222BQ8WU58 562 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 TP53INP1Q96A56 240 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 SARAFQ96BY9 339 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 MRPL57Q9BQC6 102 aaKnown RBP9.91□□□□□ -0.82
TDP1-212ENST00000555565 MRPL46Q9H2W6 279 aaKnown RBP9.91□□□□□ -0.82
TDP1-212ENST00000555565 ACKR4Q9NPB9 350 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 FARSBQ9NSD9 589 aaKnown RBP9.91□□□□□ -0.82
TDP1-212ENST00000555565 RYDENQ9NUL5 291 aaKnown RBP9.91□□□□□ -0.82
TDP1-212ENST00000555565 ZNF225Q9UK10 706 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 ADAM29Q9UKF5 820 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 BOKQ9UMX3 212 aaPredicted RBP9.91□□□□□ -0.82
TDP1-212ENST00000555565 IKBKGQ9Y6K9 419 aa9.91□□□□□ -0.82
TDP1-212ENST00000555565 ANKRD33BA6NCL7 494 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 A8MT66 165 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 FAM171A2A8MVW0 826 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 WDR1O75083 606 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 TRIM3O75382 744 aaPredicted RBP9.9□□□□□ -0.82
TDP1-212ENST00000555565 PDYNP01213 254 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 CPMP14384 443 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 S1PR1P21453 382 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 CNTFP26441 200 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 CDH13P55290 713 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 FBXW4P57775 412 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 GALNT1Q10472 559 aaPredicted RBP9.9□□□□□ -0.82
TDP1-212ENST00000555565 RPS6KA2Q15349 733 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 FBXL19-AS1Q494R0 122 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 CCNYL2Q5T2Q4 361 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 C1orf185Q5T7R7 199 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 WLSQ5T9L3 541 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 BICRALQ6AI39 1079 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 PAGE2Q7Z2X7 111 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 TAGAPQ8N103 731 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 LRRN4CLQ8ND94 238 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 TRPC4APQ8TEL6 797 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 ZNF483Q8TF39 744 aaPredicted RBP9.9□□□□□ -0.82
TDP1-212ENST00000555565 ZNF592Q92610 1267 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 DIO2Q92813 273 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 ADIPOR1Q96A54 375 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 JSRP1Q96MG2 331 aaPredicted RBP9.9□□□□□ -0.82
TDP1-212ENST00000555565 DOHHQ9BU89 302 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 C1QTNF3Q9BXJ4 246 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 OR10A5Q9H207 317 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 SLC6A15Q9H2J7 730 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 ELOVL6Q9H5J4 265 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 EXO5Q9H790 373 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 ZNF395Q9H8N7 513 aaPredicted RBP9.9□□□□□ -0.82
TDP1-212ENST00000555565 NEUROD4Q9HD90 331 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 QPCTLQ9NXS2 382 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 ALKBH4Q9NXW9 302 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 AHSPQ9NZD4 102 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 CES1P1Q9UKY3 287 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 SLC12A4Q9UP95 1085 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 NPFFR2Q9Y5X5 522 aa9.9□□□□□ -0.82
TDP1-212ENST00000555565 MXRA5Q9NR99 2828 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 A0A087WUV0 522 aaPredicted RBP9.89□□□□□ -0.83
TDP1-212ENST00000555565 INAFM1C9JVW0 142 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 OTCP00480 354 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 SNRPAP09012 282 aaKnown RBP9.89□□□□□ -0.83
TDP1-212ENST00000555565 CTAGE8P0CG41 777 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 PORP16435 677 aaPredicted RBP9.89□□□□□ -0.83
TDP1-212ENST00000555565 NT5EP21589 574 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms