RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 TYROBPO43914 113 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 TOXO94900 526 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 CPNE6O95741 557 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 EPOP01588 193 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 CAPZA1P52907 286 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 ZNF45Q02386 682 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 DAZ2Q13117 558 aaKnown RBP1.52□□□□□ -2.17
SRP54-207ENST00000555535 CD226Q15762 336 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 MFSD4BQ5TF39 518 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 STOX1Q6ZVD7 989 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 SPATA19Q7Z5L4 167 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 ADAMTSL2Q86TH1 951 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 S1PR3Q99500 378 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 C19orf43Q9BQ61 176 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 HCAR1Q9BXC0 346 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 Q9H3A6 140 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 DAZ3Q9NR90 486 aaKnown RBP1.52□□□□□ -2.17
SRP54-207ENST00000555535 SLCO1C1Q9NYB5 712 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 LEF1Q9UJU2 399 aaPredicted RBP1.52□□□□□ -2.17
SRP54-207ENST00000555535 EMCNQ9ULC0 261 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 PSG11Q9UQ72 335 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 ATG4BQ9Y4P1 393 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 RLFQ13129 1914 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 ASTN1O14525 1302 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 A0A087X0K7 114 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 A0A1B0GUA9 196 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 LCMT2O60294 686 aaKnown RBP1.51□□□□□ -2.17
SRP54-207ENST00000555535 NOL4O94818 638 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 GSTA2P09210 222 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 AKAP17AQ02040 695 aaKnown RBP1.51□□□□□ -2.17
SRP54-207ENST00000555535 ZNF85Q03923 595 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 GPNMBQ14956 572 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 KRT31Q15323 416 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 ZIC1Q15915 447 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 ZNF630Q2M218 657 aaPredicted RBP1.51□□□□□ -2.17
SRP54-207ENST00000555535 CYB5R2Q6BCY4 276 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 STEAP1BQ6NZ63 245 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 KRT74Q7RTS7 529 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 ARIH2OSQ8N7S6 290 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 DCAF4L2Q8NA75 395 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 UXS1Q8NBZ7 420 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 OR10H4Q8NGA5 316 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 RFESDQ8TAC1 157 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 MARCH1Q8TCQ1 289 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 PHF10Q8WUB8 498 aaKnown RBP1.51□□□□□ -2.17
SRP54-207ENST00000555535 GUCD1Q96NT3 240 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 FERMT1Q9BQL6 677 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 CENPOQ9BU64 300 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 GPR174Q9BXC1 333 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 RSPO3Q9BXY4 272 aaPredicted RBP1.51□□□□□ -2.17
SRP54-207ENST00000555535 OPN3Q9H1Y3 402 aaPredicted RBP1.51□□□□□ -2.17
SRP54-207ENST00000555535 OR51J1Q9H342 316 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 ESM1Q9NQ30 184 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 NECAP2Q9NVZ3 263 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 WSB1Q9Y6I7 421 aa1.51□□□□□ -2.17
SRP54-207ENST00000555535 KIF26AQ9ULI4 1882 aaPredicted RBP1.51□□□□□ -2.17
SRP54-207ENST00000555535 WWP2O00308 870 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 OR7A17O14581 309 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 MMP23AO75900 390 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 RLN1P04808 185 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 CYP11B1P15538 503 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 CCND3P30281 292 aaPredicted RBP1.5□□□□□ -2.17
SRP54-207ENST00000555535 UGT1A3P35503 534 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 SAA4P35542 130 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 RAD52P43351 418 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 RPS10P46783 165 aaKnown RBP1.5□□□□□ -2.17
SRP54-207ENST00000555535 SLC26A2P50443 739 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 VCPP55072 806 aaKnown RBP1.5□□□□□ -2.17
SRP54-207ENST00000555535 HAND2P61296 217 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 HEPACAMQ14CZ8 416 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 SLC30A6Q6NXT4 461 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 TRPM8Q7Z2W7 1104 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 GPR142Q7Z601 462 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 AQP12AQ8IXF9 295 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 C4orf19Q8IY42 314 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 CADM2Q8N3J6 435 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 BBS1Q8NFJ9 593 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 DNASE1L2Q92874 299 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 ACPTQ9BZG2 426 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 GLT8D2Q9H1C3 349 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 CARD9Q9H257 536 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 CENPMQ9NSP4 180 aa1.5□□□□□ -2.17
SRP54-207ENST00000555535 ZNF223Q9UK11 482 aaPredicted RBP1.5□□□□□ -2.17
SRP54-207ENST00000555535 AFF2P51816 1311 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 YDJCA8MPS7 323 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 SH3BP5O60239 455 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 NME6O75414 186 aaPredicted RBP1.49□□□□□ -2.17
SRP54-207ENST00000555535 FCER2P06734 321 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 ZNF823P16415 610 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 HTR1FP30939 366 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 CASP2P42575 452 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 KCNJ1P48048 391 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 ZNF41P51814 821 aaPredicted RBP1.49□□□□□ -2.17
SRP54-207ENST00000555535 C16orf72Q14CZ0 275 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 C1orf141Q5JVX7 400 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 CASC4Q6P4E1 433 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 C16orf54Q6UWD8 224 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 LUZP1Q86V48 1076 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 C9orf40Q8IXQ3 194 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 SIX6OS1Q8N1H7 587 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms