RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 VPS26AO75436 327 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 AK1P00568 194 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 AZU1P20160 251 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 PAICSP22234 425 aaKnown RBP4.41□□□□□ -1.7
VRK1-205ENST00000555402 SLC7A2P52569 658 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 HERVK_113P63132 956 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 ERVK-8P63133 956 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 HSF2Q03933 536 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 SRYQ05066 204 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 PDZK1IP1Q13113 114 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 RFTN1Q14699 578 aaPredicted RBP4.41□□□□□ -1.7
VRK1-205ENST00000555402 ZKSCAN8Q15776 578 aaPredicted RBP4.41□□□□□ -1.7
VRK1-205ENST00000555402 PARP6Q2NL67 630 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 C2CD6Q53TS8 623 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 ZNF772Q68DY9 489 aaPredicted RBP4.41□□□□□ -1.7
VRK1-205ENST00000555402 NUFIP2Q7Z417 695 aaKnown RBP4.41□□□□□ -1.7
VRK1-205ENST00000555402 P4HA3Q7Z4N8 544 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 CARM1Q86X55 608 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 CATSPER3Q86XQ3 398 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 RNF130Q86XS8 419 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 ZNF397Q8NF99 534 aaPredicted RBP4.41□□□□□ -1.7
VRK1-205ENST00000555402 OR1B1Q8NGR6 318 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 SYAP1Q96A49 352 aaPredicted RBP4.41□□□□□ -1.7
VRK1-205ENST00000555402 NABP1Q96AH0 204 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 THUMPD2Q9BTF0 503 aaKnown RBP4.41□□□□□ -1.7
VRK1-205ENST00000555402 APOOQ9BUR5 198 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 RAB11FIP5Q9BXF6 653 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 ERVK-6Q9BXR3 956 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 CCSER1Q9C0I3 900 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 Q9HAA7 133 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 NRN1Q9NPD7 142 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 SEC14L4Q9UDX3 406 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 MUTYHQ9UIF7 546 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.41□□□□□ -1.7
VRK1-205ENST00000555402 FBXO7Q9Y3I1 522 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 A0A087WZY1 265 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 NDUFAF8A1L188 74 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 CYB561D2O14569 222 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 CLDN3O15551 220 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 PEX11AO75192 247 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 STK17BO94768 372 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 HPRP00739 348 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 CA3P07451 260 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 RNF224P0DH78 156 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 DPEP1P16444 411 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 TSPAN8P19075 237 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 IL4RP24394 825 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 CYP2F1P24903 491 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 PTPN4P29074 926 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 PTPN6P29350 595 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 MAT2AP31153 395 aaKnown RBP4.4□□□□□ -1.71
VRK1-205ENST00000555402 TRPC1P48995 793 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 SGSHP51688 502 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 FUT7Q11130 342 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 BNIP1Q12981 228 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 ITPK1Q13572 414 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 ZC2HC1BQ5TFG8 222 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 RHBDD2Q6NTF9 364 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 ERASQ7Z444 233 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 VPS36Q86VN1 386 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 RANBP3LQ86VV4 465 aaPredicted RBP4.4□□□□□ -1.71
VRK1-205ENST00000555402 GIPC3Q8TF64 312 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 LRRC15Q8TF66 581 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 NPRL2Q8WTW4 380 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 ANKRD9Q96BM1 317 aaPredicted RBP4.4□□□□□ -1.71
VRK1-205ENST00000555402 CCDC51Q96ER9 411 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 C18orf12Q96KH6 178 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 PKNOX2Q96KN3 472 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 TSPAN18Q96SJ8 248 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 CHCHD5Q9BSY4 110 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 CABLES2Q9BTV7 478 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 WRAP53Q9BUR4 548 aaKnown RBP4.4□□□□□ -1.71
VRK1-205ENST00000555402 FICDQ9BVA6 458 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 COQ10BQ9H8M1 238 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 IL1RL2Q9HB29 575 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 ATXN10Q9UBB4 475 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 P2RX2Q9UBL9 471 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 BLOC1S6Q9UL45 172 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 FZR1Q9UM11 496 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 CHMP2BQ9UQN3 213 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 U3KQV3 271 aa4.4□□□□□ -1.71
VRK1-205ENST00000555402 IGLV4-3A0A075B6K6 122 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 TEX48A0A1B0GUV7 120 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 RNF212BA8MTL3 300 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 H3BMH7 237 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 H7C423 109 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 PDXKO00764 312 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 SOCS3O14543 225 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 SORBS2O94875 1100 aaKnown RBP4.39□□□□□ -1.71
VRK1-205ENST00000555402 HSD17B1P14061 328 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 PPP2R1BP30154 601 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 KIF5BP33176 963 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 MDH1P40925 334 aaKnown RBP4.39□□□□□ -1.71
VRK1-205ENST00000555402 ATP4BP51164 291 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 CCDC71Q8IV32 467 aaPredicted RBP4.39□□□□□ -1.71
VRK1-205ENST00000555402 ZNRF1Q8ND25 227 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 OR52J3Q8NH60 311 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 SSC4DQ8WTU2 575 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 MCHR2Q969V1 340 aa4.39□□□□□ -1.71
VRK1-205ENST00000555402 PINX1Q96BK5 328 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms