RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 MELKQ14680 651 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 PTPRRQ15256 657 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 FIGNL1Q6PIW4 674 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 LHFPL3Q86UP9 236 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 ZFP41Q8N8Y5 198 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 OR4K1Q8NGD4 311 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 OR14K1Q8NGZ2 314 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 RETREG1Q9H6L5 497 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 SDHAF2Q9NX18 166 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 SLIT1O75093 1534 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 UQCRC2P22695 453 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 L1CAMP32004 1257 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 TUBA3CQ13748 450 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 OR8B8Q15620 311 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 KRTCAP2Q8N6L1 136 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 DHRS9Q9BPW9 319 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 ARL6Q9H0F7 186 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 OAS1P00973 400 aaKnown RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 PRPH2P23942 346 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 PBX2P40425 430 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 XCR1P46094 333 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 NCS1P62166 190 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 TMIGD1Q6UXZ0 262 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 CMTM8Q8IZV2 173 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 STT3BQ8TCJ2 826 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 TBC1D20Q96BZ9 403 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 AURKBQ96GD4 344 aaPredicted RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 ZC3HAV1LQ96H79 300 aaKnown RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 SENP5Q96HI0 755 aaPredicted RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 MAELQ96JY0 434 aaKnown RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 EXOSC1Q9Y3B2 195 aaKnown RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 MADDQ8WXG6 1647 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 SRRM3A6NNA2 597 aaPredicted RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 TGM5O43548 720 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 BMP1P13497 986 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 SHC2P98077 582 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 LARP4Q71RC2 724 aaKnown RBP eCLIP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 OR7G2Q8NG99 324 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 NEIL3Q8TAT5 605 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 CREB3L4Q8TEY5 395 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 SGTBQ96EQ0 304 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 TRMT2BQ96GJ1 504 aaKnown RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 FAM71F1Q96KD3 344 aaPredicted RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 KCNA7Q96RP8 456 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 SMIM3Q9BZL3 60 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 OPA3Q9H6K4 179 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 KCNMB3Q9NPA1 279 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 DECR2Q9NUI1 292 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 KLHL21Q9UJP4 597 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 PLEKHM1Q9Y4G2 1056 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 LOC105369274A0A096LPK9 316 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 C12orf71A8MTZ7 269 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 SCAF4O95104 1147 aaKnown RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 AQP2P41181 271 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 APOFQ13790 326 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 FAM214AQ32MH5 1076 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 HES5Q5TA89 166 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 FAM122CQ6P4D5 195 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 KLHDC10Q6PID8 442 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 OR4N4Q8N0Y3 316 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 CCDC71LQ8N9Z2 235 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 LOC730098B7Z3J9 87 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 LEFTY2O00292 366 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 BEST1O76090 585 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 SERPINE2P07093 398 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 KITLGP21583 273 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 PYCR1P32322 319 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 RORAP35398 523 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 RFTN1Q14699 578 aaPredicted RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 GPR33Q49SQ1 333 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 FKBP1CQ5VVH2 108 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 UGT2A3Q6UWM9 527 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 C1orf127Q8N9H9 656 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 OR5L2Q8NGL0 311 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 NTAN1Q96AB6 310 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 TWNKQ96RR1 684 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 CGREF1Q99674 301 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 HNRNPABQ99729 332 aaKnown RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 BTBD17A6NE02 478 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 FAM171A2A8MVW0 826 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 SLC7A4O43246 635 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 PRICKLE3O43900 615 aaPredicted RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 ERP29P30040 261 aaKnown RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 S100A7P31151 101 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 ETV3P41162 512 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 SOX3P41225 446 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 SGSHP51688 502 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 CCNHP51946 323 aaPredicted RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 TAP2Q03519 686 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF529Q6P280 563 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 SHISA6Q6ZSJ9 500 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 HORMAD2Q8N7B1 307 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 SMCO4Q9NRQ5 59 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 PIK3C2BO00750 1634 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 RCCD1A6NED2 376 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 HSPB6O14558 160 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 RBBP9O75884 186 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 PRKXP51817 358 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 BAIAP2L2Q6UXY1 529 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms