RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 CXorf67Q86X51 503 aaPredicted RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 RBM45Q8IUH3 476 aaKnown RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 FOXRED2Q8IWF2 684 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 RHOT1Q8IXI2 618 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 DMRTC2Q8IXT2 367 aaPredicted RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 PPIL6Q8IXY8 311 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 CENPLQ8N0S6 344 aaPredicted RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 OR52B4Q8NGK2 314 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 PSMA8Q8TAA3 256 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 RHBDD1Q8TEB9 315 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 FGF11Q92914 225 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 BIRC7Q96CA5 298 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 MTERF3Q96E29 417 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 PLEKHA8Q96JA3 519 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 COPS4Q9BT78 406 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 MECRQ9BV79 373 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 GPR174Q9BXC1 333 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 OSBPL1AQ9BXW6 950 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 HOXD1Q9GZZ0 328 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 RACGAP1Q9H0H5 632 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 CHST8Q9H2A9 424 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 OR51B5Q9H339 312 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 EPB41L1Q9H4G0 881 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 PCIF1Q9H4Z3 704 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 MCCC2Q9HCC0 563 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 MRPS30Q9NP92 439 aaKnown RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 MKKSQ9NPJ1 570 aaPredicted RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 FSCN3Q9NQT6 498 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 CATSPERZQ9NTU4 200 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 PIGVQ9NUD9 493 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 UFSP2Q9NUQ7 469 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 SYBUQ9NX95 663 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 SMPD4Q9NXE4 827 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 MYEF2Q9P2K5 600 aaKnown RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 SLC17A7Q9P2U7 560 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 EIF3KQ9UBQ5 218 aaKnown RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 ZNF212Q9UDV6 495 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 HAO1Q9UJM8 370 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 DIMT1Q9UNQ2 313 aaKnown RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 CNTN6Q9UQ52 1028 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 BTBD3Q9Y2F9 522 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 WBP11Q9Y2W2 641 aaKnown RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 DHRS7Q9Y394 339 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 ASB4Q9Y574 426 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 V9GYQ6 96 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 AKAP13Q12802 2813 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 A0A096LPE4 126 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 LY6G6EA0A0G2JKS1 128 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 A0A1W2PPZ6 126 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ANKDD1BA6NHY2 528 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ARHGAP42A6NI28 874 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 A6NL46 340 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ZNF264O43296 627 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 HSF2BPO75031 334 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 VPS26AO75436 327 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ERN1O75460 977 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 ZBTB11O95625 1053 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 HBQ1P09105 142 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PAEPP09466 180 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 EBLN1P0CF75 366 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TCF4P15884 667 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 MPIP34949 423 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ACTR1BP42025 376 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 OMPP47874 163 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ALDH3B2P48448 385 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 FHITP49789 147 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 KHKP50053 298 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 SERPINH1P50454 418 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 HK3P52790 923 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 SOX8P57073 446 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PCBP4P57723 403 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 NUP107P57740 925 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 YWHAGP61981 247 aaKnown RBP eCLIP2.55□□□□□ -2
PRPF39-206ENST00000554429 CFHR1Q03591 330 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PPP3CAQ08209 521 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 RIN1Q13671 783 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 SPA17Q15506 151 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TRIP13Q15645 432 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 NPTX1Q15818 432 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 LSM12Q3MHD2 195 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 AMZ1Q400G9 498 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TMEM35AQ53FP2 167 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 C2CD6Q53TS8 623 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ACER2Q5QJU3 275 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ZBTB37Q5TC79 503 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 MEDAGQ5VYS4 303 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ALS2CLQ60I27 953 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ATG9BQ674R7 924 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 FIGNL1Q6PIW4 674 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 C19orf48Q6RUI8 117 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PAQR3Q6TCH7 311 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 FRMD7Q6ZUT3 714 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 BHLHA15Q7RTS1 189 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 TIPARPQ7Z3E1 657 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 SLC13A5Q86YT5 568 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 IRF2BP1Q8IU81 584 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 APLFQ8IW19 511 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 ZFP82Q8N141 532 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 C1orf52Q8N6N3 182 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 SLC37A3Q8NCC5 494 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms