RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 LRIT2A6NDA9 550 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 C17orf105B2RV13 164 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 TGFBR3LH3BV60 316 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 KLK8O60259 260 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 CLEC3AO75596 197 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 KRT36O76013 467 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 HSPA4LO95757 839 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 KITP10721 976 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 COX7A2P14406 83 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 CNR1P21554 472 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 DNAJA1P31689 397 aaKnown RBP8.17□□□□□ -1.1
TDP1-208ENST00000553989 DNASE1L1P49184 302 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 IST1P53990 364 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 LIM2P55344 173 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 CDKL1Q00532 357 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 ID2Q02363 134 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 FOLH1Q04609 750 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 TSNQ15631 228 aaKnown RBP8.17□□□□□ -1.1
TDP1-208ENST00000553989 C18orf21Q32NC0 220 aaPredicted RBP8.17□□□□□ -1.1
TDP1-208ENST00000553989 EMC4Q5J8M3 183 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 SH2D4BQ5SQS7 431 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 TMEM154Q6P9G4 183 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 OPN5Q6U736 354 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 C16orf89Q6UX73 402 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 SLCO4C1Q6ZQN7 724 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 C10orf107Q8IVU9 208 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 ZZZ3Q8IYH5 903 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 FBXW8Q8N3Y1 598 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 TMEM251Q8N6I4 163 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 OR2L5Q8NG80 312 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 OR5L2Q8NGL0 311 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 RP9Q8TA86 221 aaKnown RBP8.17□□□□□ -1.1
TDP1-208ENST00000553989 WDR60Q8WVS4 1066 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 SARAFQ96BY9 339 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 PDLIM5Q96HC4 596 aaKnown RBP8.17□□□□□ -1.1
TDP1-208ENST00000553989 SCYL1Q96KG9 808 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 TTYH2Q9BSA4 534 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 POLDIP3Q9BY77 421 aaKnown RBP8.17□□□□□ -1.1
TDP1-208ENST00000553989 ALOXE3Q9BYJ1 711 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 ZDHHC11Q9H8X9 412 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 IL1RL2Q9HB29 575 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 IGSF5Q9NSI5 407 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 NMRK1Q9NWW6 199 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 TMEM216Q9P0N5 145 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 EMCNQ9ULC0 261 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 PRPF19Q9UMS4 504 aaKnown RBP8.17□□□□□ -1.1
TDP1-208ENST00000553989 DAPP1Q9UN19 280 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 RAP2CQ9Y3L5 183 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 DCHS2Q6V1P9 2916 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 A0A096LPK6 155 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 A0A0G2JNJ9 132 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 ANKRD33BA6NCL7 494 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 TMEM200CA6NKL6 621 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 FAM47E-STBD1D6RA91 191 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 AQP7O14520 342 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 ZNF195O14628 629 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 ITM2AO43736 263 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 DYRK3O43781 588 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 CTNSO60931 367 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 WDR1O75083 606 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 LDB3O75112 727 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 SH3BGRLO75368 114 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 BAG2O95816 211 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 S100BP04271 92 aaPredicted RBP8.16□□□□□ -1.1
TDP1-208ENST00000553989 C2P06681 752 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 CELA3AP09093 270 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 GLI4P10075 376 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 NCF2P19878 526 aaPredicted RBP8.16□□□□□ -1.1
TDP1-208ENST00000553989 UQCRC1P31930 480 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 CPOXP36551 454 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 KCNC1P48547 511 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 RPL14P50914 215 aaKnown RBP8.16□□□□□ -1.1
TDP1-208ENST00000553989 RNF4P78317 190 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 BTKQ06187 659 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 SNTB1Q13884 538 aaKnown RBP8.16□□□□□ -1.1
TDP1-208ENST00000553989 SERTAD2Q14140 314 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 SLC10A1Q14973 349 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 PCLAFQ15004 111 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 CEBPEQ15744 281 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 HIST2H2ACQ16777 129 aaPredicted RBP8.16□□□□□ -1.1
TDP1-208ENST00000553989 SLC25A35Q3KQZ1 300 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 FBXO48Q5FWF7 155 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 C1orf185Q5T7R7 199 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 HIST2H2AA3Q6FI13 130 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 ZFP1Q6P2D0 407 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 ABHD17CQ6PCB6 329 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 TRILQ7L0X0 811 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 ZC3HC1Q86WB0 502 aaKnown RBP8.16□□□□□ -1.1
TDP1-208ENST00000553989 TCAIMQ8N3R3 496 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 LIX1Q8N485 282 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 ZNF321PQ8N8H1 164 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 GOLM1Q8NBJ4 401 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 MORN4Q8NDC4 146 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 SLC22A8Q8TCC7 542 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 SLC2A12Q8TD20 617 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 EXT2Q93063 718 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 KIAA1191Q96A73 305 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 RHBDF1Q96CC6 855 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 CCDC126Q96EE4 140 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 LRRC46Q96FV0 321 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms