RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 EIF4EBP2Q13542 120 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-210ENST00000553693 CRMP1Q14194 572 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 LTB4RQ15722 352 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 ANKRD20A4Q4UJ75 823 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 ANKRD20A8PQ5CZ79 823 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 GLRA4Q5JXX5 417 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 ANKRD20A2Q5SQ80 823 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 ANKRD20A1Q5TYW2 823 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 ANKRD20A3Q5VUR7 823 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 FAM91A1Q658Y4 838 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 ZNF600Q6ZNG1 722 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 PIWIL3Q7Z3Z3 882 aaKnown RBP2.81□□□□□ -1.96
SCFD1-210ENST00000553693 CLYBLQ8N0X4 340 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 OR13C5Q8NGS8 318 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 CD99L2Q8TCZ2 262 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-210ENST00000553693 KRT35Q92764 455 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 TEKT1Q969V4 418 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 RBM18Q96H35 190 aaKnown RBP2.81□□□□□ -1.96
SCFD1-210ENST00000553693 INTS14Q96SY0 518 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 SLC5A7Q9GZV3 580 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 MTIF3Q9H2K0 278 aaKnown RBP2.81□□□□□ -1.96
SCFD1-210ENST00000553693 S100A14Q9HCY8 104 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 TMEM161AQ9NX61 479 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 TRPC4Q9UBN4 977 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 DNAJB9Q9UBS3 223 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 HOOK1Q9UJC3 728 aaKnown RBP2.81□□□□□ -1.96
SCFD1-210ENST00000553693 CDH7Q9ULB5 785 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 USP47Q96K76 1375 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 TNRC18O15417 2968 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-210ENST00000553693 N4BP2Q86UW6 1770 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-210ENST00000553693 DOT1LQ8TEK3 1739 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 KIAA1551Q9HCM1 1747 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 USP54Q70EL1 1684 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 QRICH2Q9H0J4 1663 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 C10orf71Q711Q0 1435 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 PALLDQ8WX93 1383 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 TTC21AQ8NDW8 1320 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 CENPJQ9HC77 1338 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-210ENST00000553693 KLF18A0A0U1RQI7 1052 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 ZSCAN5CA6NGD5 496 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-210ENST00000553693 E2F3O00716 465 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 HTATSF1O43719 755 aaKnown RBP2.8□□□□□ -1.96
SCFD1-210ENST00000553693 KERAO60938 352 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 GOSR1O95249 250 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 P4HA1P13674 534 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 NT5C2P49902 561 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 NAGLUP54802 743 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 CDO1Q16878 200 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 FUT11Q495W5 492 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 MPP7Q5T2T1 576 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 ETFRF1Q6IPR1 90 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 ZNF770Q6IQ21 691 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-210ENST00000553693 NEPROQ6NW34 567 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 RFWD3Q6PCD5 774 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 MEX3DQ86XN8 651 aaKnown RBP2.8□□□□□ -1.96
SCFD1-210ENST00000553693 ZNF525Q8N782 197 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 NHLRC2Q8NBF2 726 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 ANKRD20A12PQ8NF67 263 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 FLVCR1-AS1Q8TAF5 88 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 C8orf46Q8TAG6 207 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 HEXDCQ8WVB3 486 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 GTSF1Q8WW33 167 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 MR1Q95460 341 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 SLC35C1Q96A29 364 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 BPIFA2Q96DR5 249 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 ZBED6CLQ96FA7 236 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-210ENST00000553693 BSCL2Q96G97 398 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-210ENST00000553693 SIGLEC12Q96PQ1 595 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 MCCC1Q96RQ3 725 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-210ENST00000553693 RANBP9Q96S59 729 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 MLPHQ9BV36 600 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-210ENST00000553693 ZBP1Q9H171 429 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 ZNF275Q9NSD4 429 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-210ENST00000553693 SEPT10Q9P0V9 454 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 LIPT1Q9Y234 373 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 SH3GLB1Q9Y371 365 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 FBXO7Q9Y3I1 522 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 PCDHGA1Q9Y5H4 931 aa2.8□□□□□ -1.96
SCFD1-210ENST00000553693 TOGARAM1Q9Y4F4 1720 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 C5P01031 1676 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 KTN1Q86UP2 1357 aaKnown RBP2.79□□□□□ -1.96
SCFD1-210ENST00000553693 PLEKHG2Q9H7P9 1386 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 A0A1W2PRV1 198 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 SYCE3A1L190 88 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 YDJCA8MPS7 323 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 E7ENQ6 273 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 LRRTM2O43300 516 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 RAD51DO75771 328 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 GRAP2O75791 330 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 PRB2P02812 416 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-210ENST00000553693 MT-ND3P03897 115 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 DLATP10515 647 aaKnown RBP2.79□□□□□ -1.96
SCFD1-210ENST00000553693 GPX3P22352 226 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 SRD5A2P31213 254 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 CTNNB1P35222 781 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 ALDH3B1P43353 468 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 CRKLP46109 303 aaKnown RBP2.79□□□□□ -1.96
SCFD1-210ENST00000553693 HMGCS2P54868 508 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 ST8SIA6P61647 398 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms