RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SARNPP82979 210 aaKnown RBP6.64□□□□□ -1.35
ATXN3-219ENST00000553488 ID2Q02363 134 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 TBL3Q12788 808 aaKnown RBP6.64□□□□□ -1.35
ATXN3-219ENST00000553488 GPS1Q13098 491 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 SERTAD2Q14140 314 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 CRYMQ14894 314 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 KIR3DS1Q14943 382 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 NHSL2Q5HYW2 709 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 FNDC7Q5VTL7 733 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 PRAMEF9Q5VWM5 478 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 SLC22A10Q63ZE4 541 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 VASNQ6EMK4 673 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 TMIGD1Q6UXZ0 262 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 DGAT2L6Q6ZPD8 337 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 GALNT7Q86SF2 657 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 RASGEF1CQ8N431 466 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 LIX1Q8N485 282 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 RNF10Q8N5U6 811 aaKnown RBP6.64□□□□□ -1.35
ATXN3-219ENST00000553488 C9orf106Q8NAJ2 232 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 TTLQ8NG68 377 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 OR5L2Q8NGL0 311 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 ANKRD9Q96BM1 317 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-219ENST00000553488 NTNG2Q96CW9 530 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 ZNF597Q96LX8 424 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 DACH2Q96NX9 599 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 SERINC2Q96SA4 455 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 MAPKAP1Q9BPZ7 522 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 UGT2B28Q9BY64 529 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 REXO4Q9GZR2 422 aaKnown RBP6.64□□□□□ -1.35
ATXN3-219ENST00000553488 PLAC1Q9HBJ0 212 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 GCM1Q9NP62 436 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 GALNT8Q9NY28 637 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 WHRNQ9P202 907 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 COPS7AQ9UBW8 275 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 PCDHB10Q9UN67 800 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 NPFFR2Q9Y5X5 522 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 KCNE2Q9Y6J6 123 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 IKBKGQ9Y6K9 419 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 A0A088AWK7 358 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 PABPN1LA6NDY0 278 aaKnown RBP6.63□□□□□ -1.35
ATXN3-219ENST00000553488 NPEPPSL1A6NEC2 478 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 DEFB108AA8MXU0 73 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 GOLGA8MH3BSY2 632 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 CDC7O00311 574 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 FGF17O60258 216 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 SMPD2O60906 423 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 SCELO95171 688 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 C1QAP02745 245 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 AHSGP02765 367 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 CLPSP04118 112 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 C1GALT1C1LP0DN25 315 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 ZNF37AP17032 561 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-219ENST00000553488 ZNF10P21506 573 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-219ENST00000553488 CFPP27918 469 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 OPRM1P35372 400 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 SLCO1A2P46721 670 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 STT3AP46977 705 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 CDK9P50750 372 aaKnown RBP6.63□□□□□ -1.35
ATXN3-219ENST00000553488 MTTPP55157 894 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 PPP2R2BQ00005 443 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 CDKL1Q00532 357 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 SLC7A5Q01650 507 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 STX4Q12846 297 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 FOXF2Q12947 444 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 EFTUD2Q15029 972 aaKnown RBP eCLIP6.63□□□□□ -1.35
ATXN3-219ENST00000553488 EBPQ15125 230 aaKnown RBP6.63□□□□□ -1.35
ATXN3-219ENST00000553488 NTRK2Q16620 822 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 C18orf21Q32NC0 220 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-219ENST00000553488 BICRALQ6AI39 1079 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 TTC27Q6P3X3 843 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 GALNT18Q6P9A2 607 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 TRIM40Q6P9F5 258 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 YTHDF3Q7Z739 585 aaKnown RBP6.63□□□□□ -1.35
ATXN3-219ENST00000553488 ADGRE4PQ86SQ3 457 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 P3H2Q8IVL5 708 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 PM20D2Q8IYS1 436 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 DND1Q8IYX4 353 aaKnown RBP6.63□□□□□ -1.35
ATXN3-219ENST00000553488 SLC15A4Q8N697 577 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 ZNF441Q8N8Z8 693 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 GPATCH11Q8N954 259 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 NAT8LQ8N9F0 302 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 SLC22A8Q8TCC7 542 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 IGFBPL1Q8WX77 278 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 CCT6BQ92526 530 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 WDYHV1Q96HA8 205 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 PDLIM5Q96HC4 596 aaKnown RBP6.63□□□□□ -1.35
ATXN3-219ENST00000553488 SENP5Q96HI0 755 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-219ENST00000553488 FBXL20Q96IG2 436 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 RUNDC3BQ96NL0 473 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 JMJD8Q96S16 334 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 BAG1Q99933 345 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-219ENST00000553488 MCMBPQ9BTE3 642 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 DOHHQ9BU89 302 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 BDH2Q9BUT1 245 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 CDADC1Q9BWV3 514 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 RBM24Q9BX46 236 aaKnown RBP6.63□□□□□ -1.35
ATXN3-219ENST00000553488 TRIM54Q9BYV2 358 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 NT5DC2Q9H857 520 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 LYRM4Q9HD34 91 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 HOMER3Q9NSC5 361 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms