RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 PCDHGA9Q9Y5G4 932 aaKnown RBP13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 CFAP46Q8IYW2 2715 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 K7EM74 188 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 C1QCP02747 245 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 IL6P05231 212 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 DDX5P17844 614 aaKnown RBP13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 NCF2P19878 526 aaPredicted RBP13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 ITGA3P26006 1051 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 MAP3K8P41279 467 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 CCL11P51671 97 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 CLCN2P51788 898 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 MANFP55145 182 aaKnown RBP13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 STX1BP61266 288 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 TIGD2Q4W5G0 525 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 B3GNTL1Q67FW5 361 aaPredicted RBP13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 C16orf47Q6ZP98 133 aaPredicted RBP13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 MSANTD1Q6ZTZ1 278 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 CNTRLQ7Z7A1 2325 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 ANKRD46Q86W74 232 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 LGI4Q8N135 537 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 NUBPLQ8TB37 319 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 ADIPOR1Q96A54 375 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 VPS33AQ96AX1 596 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 FAM120BQ96EK7 910 aaKnown RBP13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 ART5Q96L15 291 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 VSTM2LQ96N03 204 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 SMAD5Q99717 465 aaKnown RBP13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 EPS8L2Q9H6S3 715 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 SLC6A13Q9NSD5 602 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 GPR83Q9NYM4 423 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 PTGFRNQ9P2B2 879 aa13.77□□□□□ -0.21
MTHFD1-204ENST00000553405 A6NL46 340 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 OR6C76A6NM76 312 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 FCHO1O14526 889 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 NADKO95544 446 aaPredicted RBP13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 CDKN2CP42773 168 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 MLF1P58340 268 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 RHDQ02161 417 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 KLF10Q13118 480 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 GAB1Q13480 694 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 RAPSNQ13702 412 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 AGKQ53H12 422 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 ANXA8L1Q5VT79 327 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 TCTN3Q6NUS6 607 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 LYPD8Q6UX82 237 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 TMEM64Q6YI46 380 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 HSDL2Q6YN16 418 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 RNF111Q6ZNA4 994 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 GK5Q6ZS86 529 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 SIRT6Q8N6T7 355 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 EXD3Q8N9H8 876 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 OR52R1Q8NGF1 315 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 ZFP28Q8NHY6 868 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 GTF2H4Q92759 462 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 OR52E6Q96RD3 313 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 ZBTB18Q99592 522 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 INPP5KQ9BT40 448 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 WWTR1Q9GZV5 400 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 NEUROD4Q9HD90 331 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 GPATCH2Q9NW75 528 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 TAS2R9Q9NYW1 312 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 CCDC167Q9P0B6 97 aa13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 TNRC6AQ8NDV7 1962 aaKnown RBP13.76□□□□□ -0.21
MTHFD1-204ENST00000553405 TRBV5-3A0A0A0MS03 114 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 DYRK3O43781 588 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 ZFAND5O76080 213 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 CT45A8P0DMV1 189 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 CT45A9P0DMV2 189 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 ADSLP30566 484 aaPredicted RBP13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 AP2B1P63010 937 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 CT45A2Q5DJT8 189 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 CRB2Q5IJ48 1285 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 FCRLBQ6BAA4 426 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 NPSR1Q6W5P4 371 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 MTDHQ86UE4 582 aaKnown RBP13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 RETREG3Q86VR2 466 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 TREML1Q86YW5 311 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 ANKS4BQ8N8V4 417 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 C17orf47Q8NEP4 570 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 SFXN5Q8TD22 340 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 SPDL1Q96EA4 605 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 BTBD9Q96Q07 612 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 PHF12Q96QT6 1004 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 CCDC106Q9BWC9 280 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 DEFB126Q9BYW3 111 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 LIN28AQ9H9Z2 209 aaKnown RBP13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 ARMCX1Q9P291 453 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 MYOTQ9UBF9 498 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 COPS7AQ9UBW8 275 aa13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 GPR55Q9Y2T6 319 aaPredicted RBP13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 HEMK1Q9Y5R4 338 aaPredicted RBP13.75□□□□□ -0.21
MTHFD1-204ENST00000553405 A0A1W2PP18 115 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 CAPN14A8MX76 684 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 NR5A2O00482 541 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 FBP2O00757 339 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 SLC22A2O15244 555 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 PRAMEF2O60811 474 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 FAM87AP0C7U9 286 aa13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 TRHRP34981 398 aaPredicted RBP13.74□□□□□ -0.21
MTHFD1-204ENST00000553405 CD97P48960 835 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms