RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 CENPVL1A0A0U1RR11 272 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 C17orf113A0A1B0GUU1 675 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 TLR4O00206 839 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 FOXE1O00358 373 aaPredicted RBP5.27□□□□□ -1.57
LIMA1-215ENST00000552823 P2RX6O15547 441 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 CTSVO60911 334 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 SEMA7AO75326 666 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 HPRP00739 348 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 ADRA2AP08913 450 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 ALAS2P22557 587 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 ATP5A1P25705 553 aaKnown RBP5.27□□□□□ -1.57
LIMA1-215ENST00000552823 DCKP27707 260 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 MRPL19P49406 292 aaKnown RBP5.27□□□□□ -1.57
LIMA1-215ENST00000552823 CRISP1P54107 249 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 UGT2B15P54855 530 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 SLC35A2P78381 396 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 GPR18Q14330 331 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 FXNQ16595 210 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 AMZ1Q400G9 498 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 SPATS1Q496A3 300 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 OR2G6Q5TZ20 316 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 SLC30A6Q6NXT4 461 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 METTL2BQ6P1Q9 378 aaKnown RBP5.27□□□□□ -1.57
LIMA1-215ENST00000552823 ADAMTSL4Q6UY14 1074 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 ZNF730Q6ZMV8 503 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 USP53Q70EK8 1073 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 IGFN1Q86VF2 1251 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 CENPSQ8N2Z9 138 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 CAMKK1Q8N5S9 505 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 OR51L1Q8NGJ5 315 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 OR9Q1Q8NGQ5 310 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 GPR151Q8TDV0 419 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 RAB2BQ8WUD1 216 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 CDS1Q92903 461 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 MS4A6EQ96DS6 147 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 C11orf24Q96F05 449 aaPredicted RBP5.27□□□□□ -1.57
LIMA1-215ENST00000552823 COX14Q96I36 57 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 MRGPRX1Q96LB2 322 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 CEP19Q96LK0 163 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 QRFPRQ96P65 431 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 HDAC8Q9BY41 377 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 SACM1LQ9NTJ5 587 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 C14orf119Q9NWQ9 140 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 NLGN3Q9NZ94 848 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 ACSL5Q9ULC5 683 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 CLEC4AQ9UMR7 237 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 MAU2Q9Y6X3 613 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 CFAP54Q96N23 3096 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 FRYLO94915 3013 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 PLXNB3Q9ULL4 1909 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 LRRK1Q38SD2 2015 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 A0A1B0GVC2 190 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 A6NIN4 97 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 SLC16A6O15403 523 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 SERPINB7O75635 380 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 CLPXO76031 633 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 SEC14L2O76054 403 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 DLGAP3O95886 979 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 CCNYL3P0C7X3 344 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 HOXB9P17482 250 aaPredicted RBP5.27□□□□□ -1.57
LIMA1-215ENST00000552823 SDHBP21912 280 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 CDH3P22223 829 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 PRPH2P23942 346 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 KIR2DL1P43626 348 aaPredicted RBP5.27□□□□□ -1.57
LIMA1-215ENST00000552823 TPMTP51580 245 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 CCR4P51679 360 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 HNRNPFP52597 415 aaKnown RBP5.27□□□□□ -1.57
LIMA1-215ENST00000552823 MAZP56270 477 aaKnown RBP5.27□□□□□ -1.57
LIMA1-215ENST00000552823 STXBP1P61764 594 aaKnown RBP5.27□□□□□ -1.57
LIMA1-215ENST00000552823 KCNC4Q03721 635 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 TGM3Q08188 693 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 GRSF1Q12849 480 aaKnown RBP eCLIP5.27□□□□□ -1.57
LIMA1-215ENST00000552823 TOP3AQ13472 1001 aaPredicted RBP5.27□□□□□ -1.57
LIMA1-215ENST00000552823 UBXN2BQ14CS0 331 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 GXYLT1Q4G148 440 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 LIPKQ5VXJ0 399 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 ACSM5Q6NUN0 579 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 ABHD17CQ6PCB6 329 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 FIGLAQ6QHK4 219 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 PLEKHM3Q6ZWE6 761 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.27□□□□□ -1.57
LIMA1-215ENST00000552823 NKAIN4Q8IVV8 208 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 OR8H2Q8N162 312 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 PJA1Q8NG27 643 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 OR51A7Q8NH64 312 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 DNAJB8Q8NHS0 232 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 ZNF675Q8TD23 568 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 RSC1A1Q92681 617 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 RAB7BQ96AH8 199 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 TOE1Q96GM8 510 aaKnown RBP5.27□□□□□ -1.57
LIMA1-215ENST00000552823 BMFQ96LC9 184 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 ZNF607Q96SK3 696 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 GPA33Q99795 319 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 UCK2Q9BZX2 261 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 OR51V1Q9H2C8 321 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 MED20Q9H944 212 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 SIRT3Q9NTG7 399 aaPredicted RBP5.27□□□□□ -1.57
LIMA1-215ENST00000552823 CLN6Q9NWW5 311 aa5.27□□□□□ -1.57
LIMA1-215ENST00000552823 TUBA8Q9NY65 449 aaPredicted RBP5.27□□□□□ -1.57
LIMA1-215ENST00000552823 NDRG4Q9ULP0 352 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms